Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0426 ATGGAGTGGGTCGTCGGCGGCAAGTTTAAGATTGGTCGCAAAATCGGAAGCGGTTCATTCGGTGAAATTTATATCGCGTCAGATATGGATACTTCTGAGATCGTAGCCGTCAAAATGGAGAAGAAGAAAACAAGACATCCACAACTATTGTATGAGGCTAAATTATACAGTATTCTTCAAGGAGAAAGTGGTGTTCCGAGTATGAAATGGTGTGGTACTGATGGAGACCATAATGTTCTGGTTATTGATCTTTTGGGACGTAGTCTGGAGGACCTTTTTGTCTTCTGCGGGAGCAAGTTTTCTTTAAAAACAGTTTTGATGTTGGCCGATCAGATGCTTTCGAGAATAGAATATATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTTCTAATGGGTATTAGGAGAAAATCAAGTCAGGTTTATATAATTGATTTTGGACTAGGAAAAAGATATAGGGATCCCAAAACAAACAAGCATATTCCTTACAGAGAGAATAAAAATTTAACCGGGACTGCACGATATGCAAGTTGCAATACTCACTTAGGAATTGAGCAAAGTCGTCGTGATGATTTGGAGTCTATTGGCTATGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAGAGGAAAAATATGACAAGATTCGTGAGAAGAAGTTATCAACTTCGATTGAGAAACTTTGCGAGTCATATCCCGTGGAGTTCACGTCTTACTTTAATTATTGTCGCTCTTTGACATTTGATCAAGATCCAGATTATGGGTTCTTAAAGCGTCTGTTTCGTGATTTGTTCACTCGTGAAGGATATGAGCATGACAATTTATTCGACTGGACCATCCTAAAACAGCAACAGACAAAGAGACAAATGCAATCACCGCCTTCAAATGCTGTGCCTAGTGCTGTGCCTAGCAGTCTACAACCAATGATTGTGGAAAAGCATACAGGAATCAATAATTCACCTCAAATTACTGTAACAAAATTGGTAACCAATCTTGATCGTCTAAACGTGCGTGGGCAGCCTAAGCCATCTAATGTTAAGAATCTAAATGCCAAGAATCATACCGGAAAACATAATGTGAACAATGGTCCATCCACTTCATCTGCTTTGCCCAAATCGACTACAGAAAATGTTTCCAAGCCTGAAAGGCCCACAGGAACCTCAAACCTAGGTCGTGTATTTGGGAATAACTCCCATGTTTCAAGCAGCTGGATTCCTTCATTACGGCGAATTTCTTCAGCCAAATAG 1284 0.4003 MEWVVGGKFKIGRKIGSGSFGEIYIASDMDTSEIVAVKMEKKKTRHPQLLYEAKLYSILQGESGVPSMKWCGTDGDHNVLVIDLLGRSLEDLFVFCGSKFSLKTVLMLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYIIDFGLGKRYRDPKTNKHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESIGYVLMYFLRGSLPWQGLKAVTKEEKYDKIREKKLSTSIEKLCESYPVEFTSYFNYCRSLTFDQDPDYGFLKRLFRDLFTREGYEHDNLFDWTILKQQQTKRQMQSPPSNAVPSAVPSSLQPMIVEKHTGINNSPQITVTKLVTNLDRLNVRGQPKPSNVKNLNAKNHTGKHNVNNGPSTSSALPKSTTENVSKPERPTGTSNLGRVFGNNSHVSSSWIPSLRRISSAK* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0426 427 MobiDBLite consensus disorder prediction 350 406 - -
Tpr7g0426 427 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0426 427 Gene3D Transferase(Phosphotransferase) domain 1 1 326 - -
Tpr7g0426 427 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Tpr7g0426 427 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0426 427 PANTHER CASEIN KINASE-RELATED 1 412 - -
Tpr7g0426 427 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 412 - -
Tpr7g0426 427 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tpr7g0426 427 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tpr7g0426 427 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0426 Tpr-Chr7 3538698 3544568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0426 8 213 EF-hand Containing Proteins AT2G17890 27.700 2.79e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tpr7g0426 Pkinase 2.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0426 K08960 - gmx:100792736 707.212