Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g0418 | ATGACTAGTACTATTGAACAACCTCAAAACTCTGAAACTGATAGTACCTCAAATTCACCATCACCACCATCACAATCCCAAAAAATCAAACGCCTCAGAGACACTAACAAGCATCCGGTATACCGTGGGGTCCGAATGCGTAATTGGGGTAAATGGGTGTCTGAAATCCGCGAGCCGAGGAAAAAATCCCGAATATGGCTCGGCACATTTCCTACGCCGGAAATGGCTGCTCGAGCTCACGACGTAGCTGCTCTTAGTATAAAAGGAAGCGGCGCCATTCTCAATTTCCCTGAATTGGCTAACTCGCTCCCGAGACCTACCTCGCTAGCTCCTCGTGATGTTCAAGCCGCCGCAACCAAAGCCGCTCACATGGAGTTTCCTTCTTCAACAAACTCCTATGAATTGAGTGAAATAACTGAACTACCTCGGTTGGGAAATTGCGGAGATTTTGAGAAAGAGTTTGTGTTTATGGATTCTATTGATGCTTCTTGGATGTTTCAACCTCCTTGCTTGCACACCATGGAAGATGTGATTTGGAATGGAGTTTATAATAACTATAGCTAG | 564 | 0.4539 | MTSTIEQPQNSETDSTSNSPSPPSQSQKIKRLRDTNKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSGAILNFPELANSLPRPTSLAPRDVQAAATKAAHMEFPSSTNSYELSEITELPRLGNCGDFEKEFVFMDSIDASWMFQPPCLHTMEDVIWNGVYNNYS* | 188 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g0418 | 187 | PRINTS | Ethylene responsive element binding protein signature | 41 | 52 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | PRINTS | Ethylene responsive element binding protein signature | 63 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | SUPERFAMILY | DNA-binding domain | 40 | 98 | IPR016177 | GO:0003677 | |
Tpr7g0418 | 187 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Tpr7g0418 | 187 | ProSiteProfiles | AP2/ERF domain profile. | 40 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 10 | 131 | - | - | |
Tpr7g0418 | 187 | Gene3D | AP2/ERF domain | 40 | 98 | IPR036955 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | Pfam | AP2 domain | 39 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 10 | 131 | - | - | |
Tpr7g0418 | 187 | CDD | AP2 | 41 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Tpr7g0418 | 187 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tpr7g0418 | 187 | SMART | rav1_2 | 40 | 103 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g0418 | Tpr-Chr7 | 3452429 | 3453418 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g0418 | 10 | 186 | AP2-EREBP Transcription Factor Family | AT5G11590 | 55.714 | 4.16e-71 | 213 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Tpr7g0418 | AP2 | 1.8e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g0418 | K09286 | - | gmx:100794316 | 219.164 |