Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0411 ATGGAGTCTGTTGCCTCCAATTCTAATTCAACATCACCAAATAACAATAACAATAATAACCGTCGTCGTCATTCTCGTTTCAAACACGGCCAACCAATCTCAGACAGAATAGTTAGAGCTCTCAAACACCGTCTCCGTCTCCTCCATCGTTCCGGCTCAACTTTCTTCATATTTGGCGCAACAGGTAATGTCTACACGGTAACCCTATCGTCAACTCCCTCGTGCACGTGCCCTGACCGGACAACACCGTGCAAACACATCCTCTTCGTTATGATTCGAGTATTAGGCGTTTCACAGAACGACACATGTGTCCGTAGAAGAAACCTACGACCGTGTCAGCTTCAACGACTTCTTAACATGCCAACATTGTCCGAAGCGGTTGCAGGGTTTAAACTTCGACAAAGGTTTCATCAGTTGTTTTTCGAAGGAGGGACGTCGTCGAAGAAGGAGAGTGATGTAGAGATGGAAGAAGGTTCTTCTTGTCCTGTTTGTCTTGAAGAAATGGAGAAGGAAGAGAGATTGGTGGCTTGTGGAACATGTAGGAATGTTATTCATGAAGAGTGTTTGGTTAGATGGAAGAGAAGTAGAGGAAGAAGATCAGCTAGTTGTGTGATTTGTAGGGCAAGGTGGAGGGATAGAACAGAACAAGATAAGTATGTTAATTTATCTGCTTATGTTAGTGAGGATGATTTGATGGCACAATCATCTGGGGGTATTTGCACTGGCTAG 729 0.4417 MESVASNSNSTSPNNNNNNNRRRHSRFKHGQPISDRIVRALKHRLRLLHRSGSTFFIFGATGNVYTVTLSSTPSCTCPDRTTPCKHILFVMIRVLGVSQNDTCVRRRNLRPCQLQRLLNMPTLSEAVAGFKLRQRFHQLFFEGGTSSKKESDVEMEEGSSCPVCLEEMEKEERLVACGTCRNVIHEECLVRWKRSRGRRSASCVICRARWRDRTEQDKYVNLSAYVSEDDLMAQSSGGICTG* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0411 242 ProSiteProfiles Zinc finger RING-type profile. 161 207 IPR001841 -
Tpr7g0411 242 ProSiteProfiles Zinc finger RING-CH-type profile. 153 213 IPR011016 GO:0008270
Tpr7g0411 242 SUPERFAMILY RING/U-box 151 215 - -
Tpr7g0411 242 MobiDBLite consensus disorder prediction 1 20 - -
Tpr7g0411 242 MobiDBLite consensus disorder prediction 1 31 - -
Tpr7g0411 242 Pfam SWIM zinc finger 65 93 IPR007527 GO:0008270
Tpr7g0411 242 Pfam Ring finger domain 160 207 IPR001841 -
Tpr7g0411 242 ProSiteProfiles Zinc finger SWIM-type profile. 65 95 IPR007527 GO:0008270
Tpr7g0411 242 PANTHER - 1 232 - -
Tpr7g0411 242 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 225 IPR013083 -
Tpr7g0411 242 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 1 232 IPR039903 GO:0061630
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0411 143 233 C3H Transcription Factor Family AT3G58720 31.959 5.17e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0411 - - var:108321788 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0411 7 3390375 3391523 Tpr7g0411 7 3390375 3391523 ECH