Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0405 ATGAAAAATTCAATGGAATTTCCTTCCGTCAGCGGTTCCATAAAAATGCAATTTCGATCCTCATTCAAGTGGGAGTTGGTCGTTACTTCCTCAATCTCTAGGGGTAGAAATGTCTTGAATTTTCCCAGGGAATACACCAGAAATTGTTTAATGAACTCTGACAAGAAGATCTATCTTATTGATGTTGCATCTGGAAGAGTTTACAATTCAAAGATTTTCACTTCAGGTCAAAATAAAGAAAACAGATATGTTTACTCTTGTTGGAAGAAATTTGTGACTGAGAACAACTTGAAGTTCAGAGATAAGGTTATCTTCAATGCCACCACTGGTGATAATGTTATCCAAGTCCAGATCCTGCGTCGTCGCCGTCGTTCACGTTAG 381 0.3806 MKNSMEFPSVSGSIKMQFRSSFKWELVVTSSISRGRNVLNFPREYTRNCLMNSDKKIYLIDVASGRVYNSKIFTSGQNKENRYVYSCWKKFVTENNLKFRDKVIFNATTGDNVIQVQILRRRRRSR* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0405 126 SMART B3_2 22 122 IPR003340 GO:0003677
Tpr7g0405 126 SUPERFAMILY DNA-binding pseudobarrel domain 25 121 IPR015300 -
Tpr7g0405 126 Pfam B3 DNA binding domain 28 121 IPR003340 GO:0003677
Tpr7g0405 126 Gene3D - 10 123 IPR015300 -
Tpr7g0405 126 ProSiteProfiles B3 DNA-binding domain profile. 24 122 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0405 Tpr-Chr7 3370053 3370830 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr7g0405 B3 4.8e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0405 - K06308 mtr:MTR_6g087720 50.447