Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0401 ATGGAAGCTCAAGAGTTTTTCCATACCAACTTTTCCTCAGACAATAATGCCACAATCAACAATGTAAACACTGCTGTTTCTGACCACTTTGTAGTTGAAGATCTCTTTGATTTCTCTAATGATGATGATGCTACTATTACCGACCCCGCTTTCGACGACTCTCCTCCTACCAACTCTAATGATTCTCCCCCTCCCGAAACCAACACCAATTCCAATTTTTTCGTCGATAATTCATGCCAAAACTCGGCAGACGGCCCTTTCTCCGGCGAACTTTCCGTCCCGTATGATGATCTTGCGGAGCTGGAATGGCTATCCAAATTTGCCGAAGAATCATTTTCGAGCGAGGACCTACAAAAGCTACAATTGATATCTGGTGTGAAAGCATCAAATGACACTACATCAAAAACTCAAATCGAATCTAACCCAATATTACACCCTCAAGTGTCAGTCCCAGCCAAAGCCCGCAGTAAGCGGTCACGTGGACCTCCATGCAACTGGACTTCACGTCTTCTAGTTCTCTCTCCAACTACCACCACCACCACCACCACCACCACGACATCTTCTCAGTTTGACACTATTGCACCATTAAAGAAACCCTCTCCAAGAAAGAGAGACACCAATGATGGAGGGGAGGGACGCAAGTGCCTTCATTGTGCCACCGATAAAACTCCTCAGTGGCGAACTGGGCCATTGGGCCCAAAGACACTTTGCAATGCTTGTGGTGTTAGGTACAAGTCAGGTCGACTTGTACCTGAATATAGGCCTGCAGCAAGCCCAACATTCGTGTTGACTAAACACTCCAACTCGCATCGAAAGGTGCAAGAGCTCCGGCGCCAAAAGGAGATGATGAGGGCCCAACAACACCAATTGTTGCAACTACAACATCATCACAACCTTATGTTTGATGGAGCATCCAACGGTGATGATTACTTGATCCATCAACATGTGGGACACGATTTCACGCACCTAATGTAG 975 0.4646 MEAQEFFHTNFSSDNNATINNVNTAVSDHFVVEDLFDFSNDDDATITDPAFDDSPPTNSNDSPPPETNTNSNFFVDNSCQNSADGPFSGELSVPYDDLAELEWLSKFAEESFSSEDLQKLQLISGVKASNDTTSKTQIESNPILHPQVSVPAKARSKRSRGPPCNWTSRLLVLSPTTTTTTTTTTTSSQFDTIAPLKKPSPRKRDTNDGGEGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSHRKVQELRRQKEMMRAQQHQLLQLQHHHNLMFDGASNGDDYLIHQHVGHDFTHLM* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0401 324 CDD ZnF_GATA 214 261 IPR000679 GO:0006355|GO:0043565
Tpr7g0401 324 Gene3D - 210 290 IPR013088 GO:0006355|GO:0008270
Tpr7g0401 324 ProSitePatterns GATA-type zinc finger domain. 215 240 IPR000679 GO:0006355|GO:0043565
Tpr7g0401 324 PANTHER GATA TRANSCRIPTION FACTOR 1 324 - -
Tpr7g0401 324 ProSiteProfiles GATA-type zinc finger domain profile. 209 245 IPR000679 GO:0006355|GO:0043565
Tpr7g0401 324 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 210 272 - -
Tpr7g0401 324 MobiDBLite consensus disorder prediction 176 210 - -
Tpr7g0401 324 SMART GATA_3 209 259 IPR000679 GO:0006355|GO:0043565
Tpr7g0401 324 Coils Coil 273 293 - -
Tpr7g0401 324 Pfam GATA zinc finger 215 248 IPR000679 GO:0006355|GO:0043565
Tpr7g0401 324 PANTHER GATA TRANSCRIPTION FACTOR 1 324 - -
Tpr7g0401 324 MobiDBLite consensus disorder prediction 176 194 - -
Tpr7g0401 324 PIRSF Txn_fac_GATA_plant 2 305 IPR016679 GO:0003677|GO:0005634|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0401 Tpr-Chr7 3346738 3349659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0401 2 324 C2C2-Gata Transcription Factor Family AT5G25830 48.864 1.59e-88 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Tpr7g0401 GATA 1.6e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0401 - - gmx:100776588 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0401 7 3346738 3349659 Tpr7g0401 7 3346738 3349659 ECH