Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0399 ATGGCCAAAGAAACTTCAAAATCCCTCACGTTTATGTGCTTTTTCATGTTCATGTTCATGCTCAACTTCTACCCATCCCATGGAGAACAAGAGTTCGAGCTTCTTTTATCTTTCAAAGCATCCATCAAATTTGATCCTCTAAACTTACTCTCCAACTGGGTCAACACTTCGTCTATCACTATCTGCAAGTGGCATGGCATAACCTGCGACAACTGGTCGCACGTTAACACCGTGTCACTCTCAGGAAAAAACTTCTCCGGCGAGGTTTCCTCGTCTATCTTCCAACTTCCACATGTTACAAACCTAGACCTCTCCAACAACCAGCTTGTTGGAGAAGTCGTCTTCAACTCTCCCTTCCTCTCTTCACTTCTTTACCTCAATCTCAGCAACAACAACCTCACCGGTTCTTTACCACAATCCTTATTTTCATCATCGTTTATCAACCTCGAAACTCTTGATCTCTCAAACAACATGTTTTCAGGCAAAATACCAGACCAAATTGGATTCCTTTCAAGCTTAACATATATTGATCTAGGTGGCAATGTTTTGGTAGGAAAAATTCCAAATTCCATCACCAACATGACAAGTTTAGAGTACTTAACTTTGGCTTCAAACCAATTAGTTGGTGAGATTCCAACAGAGATAAGTCTAATGAAGAGGTTGAAATGGATCTACCTAGGATACAACAATCTTTCAGGTGAGATTCCAAAGAGCATTGGAAACTTACTTTCATTGAAGCACCTTAATCTTGTTTACAACAATCTCACAGGACAAATTCCTGAATCACTTGGAAACCTCACTAATCTTCAATATCTCTTTCTCTACCTAAACAAACTCACTGGCCCAATTCCCAAATCCATATTCCAATTGAAGAATCTTATTTCACTTGATCTCAGTGATAATTCTCTTTCAGGAGAGATTTCAAACCTTGTTGTTAACCTTCAAAAACTAGAGATTCTTCATCTTTTCTCAAACAACTTCACAGGTAAAATTCCAAACACTATAACATCTTTACCTCACCTTCAAGTTCTTCAACTCTGGTCAAACAAATTAACAGGTGAAATTCCACAAACACTTGGCATGCACAACAACCTCACAATTCTTGACCTCTCTTCAAACAACCTCACAGGCAAAATCCCAAACACCTTATGTGCATCCAAAAATCTTCAAAAACTTATCCTCTTTTCAAACTCTTTCAAAGGTGAAATCCCAAAAGGATTAACCTCTTGTAAAACCTTACAAAGAGTGAGACTCCAAAACAACAAATTATCTGGAAAATTGCCATTGGAAATCACCCAATTGCCCCAAATATACTTGTTGGATATCTCTGGAAACAAACTCTCTGGAAGAATCAATGATAGAAAATGGAACATGCCATCACTTCAAATGCTTAATTTAGCTAACAACAATTTCTATGGAGAATTACCAAACTCTTTTGGTAGTAAAAAACTTGAAGGATTGGACCTATCACAAAATCAATTTTCTGGTTACATTCAAATTGGTTTCAAAAATTTACCAGAGCTTGTTCAATTGAAACTCAACAATAACAAACTCTTTGGAAAATTTCCAGAACAACTTTTCCAATGCAACAAACTTGTTTCATTAGAATTAAGTCATAATCAGTTACTCGGCGAGATTCCGACAAAACTCGCCGATATGCCGGTTCTCGGTTTACTTGACTTATCGGAGAATCAATTTTCCGGTGAAATTCCAAAGAATTTAGGAAATGTTGAATCGCTTGTTGAAGTTAACGTATCGTATAATCATTTTCATGGAAAATTACCTTCCACTGAAGCTTTCTTTGCAATCAATGCAAGTTCAGTCGCCGGAAATAATCTCTGTGACGGTGACGGCGATGGTTCTAACGGTTTGCCACCGTGCAAGAGAAACAATCAGATGAATTCAACTACTTTGTTTTTTTCAGTTTGTGTTGTGTTAACGGGTTTGGTCGTTTTCGTTGGTGCTGGTTTTCTCGTTGTTTTCGTGCAAAGAAGGAGGAAGAATTTTGAGGTACGAAGAGTGGTTGAAAATGAAGATGGTTCTTGGGAAATGATTTTCTTCGATTCTACAGCGTCGAAATTTATTACCGTTGAGGATGTTTTATCATCGGTTAAAGAAGGAAAAGCGATTTCAAAAGGAAGAAACTGGGTTTCGTACGAAGGAAAGTGTGTGGCCAATGAAATGCGTTTCGTGGTGAAAGAAATAATTGACACGAATTCTGTTTCGGTTAGTTTTTGGGATGATACGGTGACGTTTGGTAAAAAAGTGAGACATGAGAATATTGTTAAGCTTATTGGAATGTTTAGGTGTGGCAAAAGAGGGTATTTGGTTTATGAGTTTGAAGAGGGAAAAAATTTGAGGGAAATTTTGCATAATTTGAGCTGGCAAAAGAGGTGGAAAATTGCGGTCGCAGTTGCAAAAGCGATTAAGTTCTTGCATCATGAGTGCTTGTGGATTGGTTTGGTTGGTGAGGTGTCACCAGAGATGGTTTTGGTGGACGAAAAAGGGGTTCCTCACCTTGAACTCAACCCTCCCGGTATAGGAACACTGATTATGGACATGAAATGTTTTGTTTCTTCTTCCTACGTTGCTCCAGAGAAAAGAAATGGGAAAGATGTGACAGAGAAGAGTGAGATATATGGTTTTGGAGTTATGCTGATTGAATTATTAACGGGAAGAAGCACCATAGACATTGAAGCAGGAAATGGTATTCATCACAAGAATAATATTGTTGAGTGGGCCCGTTATTGTTACTCTGATTGTCATCTTGACACGTGGATAGATCCTGTTATGATCAAGGGTGGAGATGTATCATCTTATCAAAACAACATTATTGAGACCATGAATCTAGCCTTGCAATGTACCGCAGCTGATCCCACCACTAGGCCATGCGCAAGAGATGTACTCAAAGCCCTAGCTACTGTTCATTGCAGCACAAACACTTTTTGCTGA 2952 0.3852 MAKETSKSLTFMCFFMFMFMLNFYPSHGEQEFELLLSFKASIKFDPLNLLSNWVNTSSITICKWHGITCDNWSHVNTVSLSGKNFSGEVSSSIFQLPHVTNLDLSNNQLVGEVVFNSPFLSSLLYLNLSNNNLTGSLPQSLFSSSFINLETLDLSNNMFSGKIPDQIGFLSSLTYIDLGGNVLVGKIPNSITNMTSLEYLTLASNQLVGEIPTEISLMKRLKWIYLGYNNLSGEIPKSIGNLLSLKHLNLVYNNLTGQIPESLGNLTNLQYLFLYLNKLTGPIPKSIFQLKNLISLDLSDNSLSGEISNLVVNLQKLEILHLFSNNFTGKIPNTITSLPHLQVLQLWSNKLTGEIPQTLGMHNNLTILDLSSNNLTGKIPNTLCASKNLQKLILFSNSFKGEIPKGLTSCKTLQRVRLQNNKLSGKLPLEITQLPQIYLLDISGNKLSGRINDRKWNMPSLQMLNLANNNFYGELPNSFGSKKLEGLDLSQNQFSGYIQIGFKNLPELVQLKLNNNKLFGKFPEQLFQCNKLVSLELSHNQLLGEIPTKLADMPVLGLLDLSENQFSGEIPKNLGNVESLVEVNVSYNHFHGKLPSTEAFFAINASSVAGNNLCDGDGDGSNGLPPCKRNNQMNSTTLFFSVCVVLTGLVVFVGAGFLVVFVQRRRKNFEVRRVVENEDGSWEMIFFDSTASKFITVEDVLSSVKEGKAISKGRNWVSYEGKCVANEMRFVVKEIIDTNSVSVSFWDDTVTFGKKVRHENIVKLIGMFRCGKRGYLVYEFEEGKNLREILHNLSWQKRWKIAVAVAKAIKFLHHECLWIGLVGEVSPEMVLVDEKGVPHLELNPPGIGTLIMDMKCFVSSSYVAPEKRNGKDVTEKSEIYGFGVMLIELLTGRSTIDIEAGNGIHHKNNIVEWARYCYSDCHLDTWIDPVMIKGGDVSSYQNNIIETMNLALQCTAADPTTRPCARDVLKALATVHCSTNTFC* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0399 983 ProSiteProfiles Leucine-rich repeat profile. 122 144 IPR001611 GO:0005515
Tpr7g0399 983 SMART serkin_6 704 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0399 983 ProSiteProfiles Protein kinase domain profile. 704 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0399 983 SMART LRR_typ_2 266 290 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 146 170 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 458 481 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 364 386 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 96 117 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 194 218 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 338 362 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 553 577 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 505 529 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 242 265 IPR003591 -
Tpr7g0399 983 SMART LRR_typ_2 120 144 IPR003591 -
Tpr7g0399 983 SUPERFAMILY Protein kinase-like (PK-like) 680 975 IPR011009 -
Tpr7g0399 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 13 976 - -
Tpr7g0399 983 Gene3D Ribonuclease Inhibitor 296 622 IPR032675 -
Tpr7g0399 983 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Tpr7g0399 983 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Tpr7g0399 983 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Tpr7g0399 983 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Tpr7g0399 983 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Tpr7g0399 983 Gene3D Phosphorylase Kinase; domain 1 689 780 - -
Tpr7g0399 983 SUPERFAMILY RNI-like 283 594 - -
Tpr7g0399 983 Gene3D Ribonuclease Inhibitor 219 295 IPR032675 -
Tpr7g0399 983 Gene3D Ribonuclease Inhibitor 145 218 IPR032675 -
Tpr7g0399 983 Pfam Protein kinase domain 709 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0399 983 PANTHER - 13 976 - -
Tpr7g0399 983 ProSiteProfiles Leucine-rich repeat profile. 364 386 IPR001611 GO:0005515
Tpr7g0399 983 Gene3D Ribonuclease Inhibitor 30 144 IPR032675 -
Tpr7g0399 983 Gene3D Transferase(Phosphotransferase) domain 1 782 981 - -
Tpr7g0399 983 SUPERFAMILY L domain-like 48 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0399 Tpr-Chr7 3296135 3300147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0399 11 972 Receptor kinase-like Gene Family AT2G25790 49.076 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Tpr7g0399 Pkinase 3.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0399 - - gmx:100777118 1326.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0399 7 3296135 3300147 Tpr7g0399 7 3296135 3300147 ECH