Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0348 ATGGGTACTGGTTGGAGAAGAGCCTTTTGTACACGAGATCCTGAATCTACCATATCAGATAATAACAACAACAACAACAACAATGGAGTCTCAAGCCCAAGTTCAAGCCCAAGCCCAAGAAGCTGTGTTCGATTGAGTTTTCTTTCTGGAGGTAGTAGTAATCCTTCAACTCCACGTTTGCATCAATCTCAACCAGTTTCAAGTCCAAGCTTGCGTTGTCGTACAATAACTGAAGCAGCTTCTCAAATTACAAATGATAGTCCCAGATTTCATAGCAAAAACAACACTCCAAGAGCAACTAAATCTCCTAGACCAAATCAAACATCAAATCCTTCTTCTCCTCGCTCTCCTTTGAAGTTATCCCTCTTCAAAAACAGCTTCAAATTCAGGAGTAGCTGTGGAATCTGTTTGAATAGTGTGAAAACGGGACAGGGAATGGCGATATACACAGCAGAATGTGCACATGCTTTTCATTTCCCGTGTATAGCAGCACATGTACGCAACCATGCTACTCTCGTTTGCCCTGTTTGCAACGCTACATGGAAAGACGTTCCTCTACTAGCGGCGCACAAGAATCTCGCAGCTACAAAATCCAACGAAATCTCCAATGCAAGTGACAAAATTCAAACGGAAATTCCCTCTCCGGTTTTCAGAACCAAAAGCTTGGATCAGTCTCAACAACAAAAGCATTCTGAATCAATGAGATCTTACGACGATGATGAACCACTCATTTCTCCGACTTCCGGTGGTGGAAGGATTAACACTATTCCTGAAGCAGATGAAAATGCTGAAGAGGAAGAAGACGATGACAACGTTGAGTTTCAAGGATTTTTCGTCAACACAAAATCTTCCTCAACTAACAAATCCTACTCTGACGATAAACAATCCGGTGATGCAGATTCAAGAACTGTTCAGGTGAAGCTAATGCCGGAGTGTGCAGTGGTATCAATTTCCAGAACGCACGAAACATACGCTTTGGTTTTAAAAGTAAAAGCACCACCGCCTCTCCGCGGCGGAAGCAGCACTCTAGATCCTTCCCGGCGAGCACCGATAGATCTCGTTACAGTTCTCGATGTTGGTGGAAGCATGAGCAGTGCAAAGCTTCACATGCTAAAACGCGCGATGCGTTTGGTTATTTCATCTCTTGGTCCAGCTGATAGGCTTTCTATCGTTGCTTTTTCTGCTATTTCCAAACGACTCTTACCGTTAAGAAGAATGACGGCACAGGGTCAACGTTTGGCTCGGCGTATCGTTGACCGTCTTGTTACCGGTGAAGGAAACAACAGCGTTAGTGAAGCTTTGAGAAAAGCAACAAGTGTGTTAGAAGATCGGAGAGAAAGAAACCCGGTTGCAAGTGTCATGTTATTATCCGACGGTCAAGATGAGAAGGTTAACAACAATAACAAACAAAATCAACGAAAGACATGGAGCCACGCGTCATCGACCCGGTTCGCGCATATTGAAATTCCGGTTCATGCGTTTGGGTTTGGTAATAAAAGCGGTTACAGTCATGAACCGGGTGAGGATGCGTTTGCAAAGTGTGTTGGTGGGCTTTTGAGCGTTGTTGTTCAAGACTTAAGAGTTCAATTGGGCTTTCAATCTGATTCGGCCCGGGCCGAAATTAGTGCTATCTATTCATGCAGTGGAAGGCCCACGCTGTTAAGCTTAGGAGCCGTACGGCTCGGCGATTTATACGCCGAAGAAGAAAGAGAACTATTGGTGGAGATGAGAGTTCCAGCGTCAGCATTGGGGAATGGGACCCACCATGTGATGACGGTAAGGTGTCTTTATAAAGACCCAGCAAGTCAAGAGATAGTATACGGTAGAGAACAGGGACTTATGGTACAACTACCTCAGCATCAATCTCAGACCGTACGATCATCATCAGGAATGAGGATCGAACGGTTGAGGAATCTTTTCATAACTACACGAGCCATAGCTGAATCAAGGAGGCTTCTAGATCATAACAATGACTTCACCAGCGCTCATCATTTACTAGCTTCAGCTCGTGCGCTTTTGATTCAATCTGGCTCAGCTTCAGCTGAACAATATGTACGTGGCTTGGAAGCTGAACTTGCAGAGCTACATTGGAGGAGACAACAAGAACAGGTTCAAGTTGAAGTTCAGCAACATCAATTGATGCAAAGGAGAAGAGGGGGTGAGAATTTGGTGGATGAAAATGGTGAGCCGCTTACACCAACATCGGCTTGGAGAGCAGCTGAGAAGCTGGCTAAGATGGCTATGGTCAAGAAGTCTTTAAATAAAGTCAGCGACTTACACGGCTTTGAAAATGCTAGGTTTTAA 2304 0.4462 MGTGWRRAFCTRDPESTISDNNNNNNNNGVSSPSSSPSPRSCVRLSFLSGGSSNPSTPRLHQSQPVSSPSLRCRTITEAASQITNDSPRFHSKNNTPRATKSPRPNQTSNPSSPRSPLKLSLFKNSFKFRSSCGICLNSVKTGQGMAIYTAECAHAFHFPCIAAHVRNHATLVCPVCNATWKDVPLLAAHKNLAATKSNEISNASDKIQTEIPSPVFRTKSLDQSQQQKHSESMRSYDDDEPLISPTSGGGRINTIPEADENAEEEEDDDNVEFQGFFVNTKSSSTNKSYSDDKQSGDADSRTVQVKLMPECAVVSISRTHETYALVLKVKAPPPLRGGSSTLDPSRRAPIDLVTVLDVGGSMSSAKLHMLKRAMRLVISSLGPADRLSIVAFSAISKRLLPLRRMTAQGQRLARRIVDRLVTGEGNNSVSEALRKATSVLEDRRERNPVASVMLLSDGQDEKVNNNNKQNQRKTWSHASSTRFAHIEIPVHAFGFGNKSGYSHEPGEDAFAKCVGGLLSVVVQDLRVQLGFQSDSARAEISAIYSCSGRPTLLSLGAVRLGDLYAEEERELLVEMRVPASALGNGTHHVMTVRCLYKDPASQEIVYGREQGLMVQLPQHQSQTVRSSSGMRIERLRNLFITTRAIAESRRLLDHNNDFTSAHHLLASARALLIQSGSASAEQYVRGLEAELAELHWRRQQEQVQVEVQQHQLMQRRRGGENLVDENGEPLTPTSAWRAAEKLAKMAMVKKSLNKVSDLHGFENARF* 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0348 767 MobiDBLite consensus disorder prediction 283 302 - -
Tpr7g0348 767 CDD RING-H2 133 178 - -
Tpr7g0348 767 Gene3D von Willebrand factor, type A domain 352 516 IPR036465 -
Tpr7g0348 767 ProSiteProfiles Zinc finger RING-type profile. 133 178 IPR001841 -
Tpr7g0348 767 Pfam RING-like zinc finger 133 162 IPR001841 -
Tpr7g0348 767 MobiDBLite consensus disorder prediction 204 231 - -
Tpr7g0348 767 MobiDBLite consensus disorder prediction 204 253 - -
Tpr7g0348 767 SUPERFAMILY RING/U-box 127 183 - -
Tpr7g0348 767 SMART VWA_4 350 538 IPR002035 -
Tpr7g0348 767 CDD vWA_C3HC4_type 351 523 - -
Tpr7g0348 767 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 767 - -
Tpr7g0348 767 MobiDBLite consensus disorder prediction 1 117 - -
Tpr7g0348 767 MobiDBLite consensus disorder prediction 14 117 - -
Tpr7g0348 767 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 767 - -
Tpr7g0348 767 SUPERFAMILY vWA-like 350 526 IPR036465 -
Tpr7g0348 767 SMART ring_2 133 177 IPR001841 -
Tpr7g0348 767 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 124 188 IPR013083 -
Tpr7g0348 767 Pfam von Willebrand factor type A domain 352 498 IPR002035 -
Tpr7g0348 767 ProSiteProfiles VWFA domain profile. 352 498 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0348 Tpr-Chr7 2829939 2833102 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0348 125 272 C3H Transcription Factor Family AT3G03550 24.026 2.96e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0348 - - lja:Lj3g3v3131860.1 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0348 7 2829939 2833102 Tpr7g0348 7 2829939 2833102 ECH