Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0302 ATGGGTTGGACAAGAGAAGAAAATAGGCGTTTTGAGGATGCACTTGCAGTATATGGTCCTGAAGATCCAAATAGGTGGCAACATGTAGCTAATGCTGTTGGTGGAAAATCTGTACAAGAGGTGAAAATGCACTATGAGATCCTTAAGGAAGATCTCATTCGAATTGAGCATGATCAAATACCACTACCTACTTATAGGGGGGGTGCTGGTATCAATATCAACAATGGAAGGAAATTATTTGGTGATGAACAAAGGCGAATGAGGAATCTTAATATCCACTGA 282 0.4007 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVGGKSVQEVKMHYEILKEDLIRIEHDQIPLPTYRGGAGININNGRKLFGDEQRRMRNLNIH* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0302 93 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Tpr7g0302 93 CDD SANT 3 49 IPR001005 -
Tpr7g0302 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Tpr7g0302 93 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Tpr7g0302 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Tpr7g0302 93 Gene3D - 2 50 - -
Tpr7g0302 93 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Tpr7g0302 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Tpr7g0302 93 SMART sant 3 51 IPR001005 -
Tpr7g0302 93 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0302 Tpr-Chr7 2461215 2463471 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr7g0302 Myb_DNA-binding 3.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0302 - - gmx:100789698 146.362