Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0284 ATGGAATCTACAAATCTACATCATCTCCAAGACCAACATCATCATCCTCCTCCTCCTCCTCCTGTTTCCACTACCCCATATGCAGTTGGAGGAACCACCACTACCACCAACTCTTGGACCCCAAACTTCACTTTGAACAATGCTGCAAGTAGCTTCAACTCAAATAACCTCCAAGAAGATAATCCTAGATCATATTCAAGATCATCTTTAACACACAAGAAGAACCATATGATTCAAGATTTAGGTTATCAGCATCATCATCAGTGGACAAGTACTGATAATGAGTCAAGTCATAACAACTTAGATTCACATGAATTTTCCAAGAATAGTAGTACTAGTACTATTAAGGAAGAGATCTCATTTGCTAATTTCCCCAAATTCACTGAAATGCTTAATTACACGACTCCTAATTATCCAATACTTCCTAATTCTACTACAACACAGATGAAGAATATTAACAATGAAGAACACAAAGATATGAATGCTCTCATGCTCAAGACCCTTTTTACTGCTGAAGATTTTTATAATGCTCAAAATTATCCAAACCAAATGTTGGAAGGCACTAGTAACAATAATATTAGTAGCCAGATTCATCCTAGTATAAATATCTCAAACTTGAATCATTACTCGTCTTCGGCCGGTTCGTCTTCCTTGGATATGAACATGCAGTCATTAGATCTATTAACTAATTCACCAACATCACTTAGCCAACATTCACAAGATCATCATCATCATAATCTTGGTAGATTTACTACTCATGATCATGAAAACCTTTCTTTTGGTCTTCATCCTATGCAGCAACCAACCAACATGTCATCTTCTACTAACTCTATCAATAAGCCATCGCTATTGAGCAATGTTGAAACAAAAAGAGGATGCACATTGATGGAGTCAAAGGCTTCTCAATCTCAAACAGCATTGAAAAAACCACGATCTTCATCTGAACCACGCCCTTCATGCCCACCTTTTAAGGTTAGGAAAGAGAAATTAGGGGATAGGATTGCATCTCTTCAACAGTTGGTGGCTCCTTTTGGAAAGACAGACACTGCATCCGTACTCATGGAAGCTATTGGATACATCAAGTTCCTTCAAGGCCAAGTCGAGACACTGAGTGTTCCCTATATGAAATCATCACAGAACCAAAACAACAGAGTGATGCAAGGGGGTTCAGGCACAAGTGATACAAATGGTGAAGCAAAGCAAGATCTGAGAAGTAGAGGCCTCTGTCTGGTGCCACTGTCATGCATGTCATACATAGCAGGTGATGGCTGCCCTGAAGTGTGGCAACAACGTCCAAACTTTGGTGGACCAGCTTAA 1317 0.3933 MESTNLHHLQDQHHHPPPPPPVSTTPYAVGGTTTTTNSWTPNFTLNNAASSFNSNNLQEDNPRSYSRSSLTHKKNHMIQDLGYQHHHQWTSTDNESSHNNLDSHEFSKNSSTSTIKEEISFANFPKFTEMLNYTTPNYPILPNSTTTQMKNINNEEHKDMNALMLKTLFTAEDFYNAQNYPNQMLEGTSNNNISSQIHPSINISNLNHYSSSAGSSSLDMNMQSLDLLTNSPTSLSQHSQDHHHHNLGRFTTHDHENLSFGLHPMQQPTNMSSSTNSINKPSLLSNVETKRGCTLMESKASQSQTALKKPRSSSEPRPSCPPFKVRKEKLGDRIASLQQLVAPFGKTDTASVLMEAIGYIKFLQGQVETLSVPYMKSSQNQNNRVMQGGSGTSDTNGEAKQDLRSRGLCLVPLSCMSYIAGDGCPEVWQQRPNFGGPA* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0284 438 MobiDBLite consensus disorder prediction 88 114 - -
Tpr7g0284 438 MobiDBLite consensus disorder prediction 297 325 - -
Tpr7g0284 438 MobiDBLite consensus disorder prediction 297 312 - -
Tpr7g0284 438 MobiDBLite consensus disorder prediction 51 70 - -
Tpr7g0284 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 314 363 IPR011598 GO:0046983
Tpr7g0284 438 MobiDBLite consensus disorder prediction 1 21 - -
Tpr7g0284 438 MobiDBLite consensus disorder prediction 51 65 - -
Tpr7g0284 438 CDD bHLH_AtbHLH_like 321 371 IPR045239 -
Tpr7g0284 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 377 IPR036638 GO:0046983
Tpr7g0284 438 PANTHER OS01G0105700 PROTEIN 151 422 - -
Tpr7g0284 438 Gene3D - 324 387 IPR036638 GO:0046983
Tpr7g0284 438 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 151 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0284 Tpr-Chr7 2343046 2348193 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0284 33 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 37.637 1.08e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0284 - - mtr:MTR_3g112170 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0284 7 2343046 2348193 Tpr7g0284 7 2343046 2348193 ECH