Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0268 ATGGAAGTTGAGGAGAGAAAAAAGTCGAAGAAGCCAGCACAGGCCAACTCTAGAAAAGGTTGTATGAAAGGTAAAGGAGGCCCTGAAAACGCGAGTTGCCCTTACAAGGGTGTGAGACAGAGAACTTGGGGTAAATGGGTTGCTGAAATCCGTGAGCCCAATCGTGGCGCTCGTCTTTGGCTTGGAACATTTAAAACATCTCGTGAAGCTGCCTTGGCTTATGACGCTGCCGCACGTAAGCTTTATGGATCAAGGGCCAAGCTCAATCTACCTGAAATCTCTATGTCTAAGAAATCTCAGGGTCAACAATCTCTCCCCGACCCTCAAAATGTCAAAACTGGAGATTCGTACCCGCCTCAAATTAATCACAGTGTAGACATGGTCACGAGTTCCGATTTCAATGCCAACCCTAACCCTACAATACCGATGGCTTCTCAACCATTACGCAACAATGATTGCACACCCTCTTTACCCTTGGATGGCAACCCTAATCCAATTGATCCAACCTTTGAGGATTTTTTGCCATCTCTGGAAACAACGAATGGTGGTTTTTCGAGTTTAAGTGATTCCATATGGCCTGATGATGCCATGCCAATAGATTTTCCTATTAATTATGCAAATTCTGGGATTTTTACAGAGGCAAACATGGCAGATGGAAATGGTTGGGACTCATTGCAAACTCCATGGTGCATGTAA 696 0.4483 MEVEERKKSKKPAQANSRKGCMKGKGGPENASCPYKGVRQRTWGKWVAEIREPNRGARLWLGTFKTSREAALAYDAAARKLYGSRAKLNLPEISMSKKSQGQQSLPDPQNVKTGDSYPPQINHSVDMVTSSDFNANPNPTIPMASQPLRNNDCTPSLPLDGNPNPIDPTFEDFLPSLETTNGGFSSLSDSIWPDDAMPIDFPINYANSGIFTEANMADGNGWDSLQTPWCM* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0268 231 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Tpr7g0268 231 SUPERFAMILY DNA-binding domain 34 91 IPR016177 GO:0003677
Tpr7g0268 231 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 CDD AP2 35 92 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 MobiDBLite consensus disorder prediction 1 33 - -
Tpr7g0268 231 Pfam AP2 domain 35 83 IPR001471 GO:0003700|GO:0006355
Tpr7g0268 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D 8 217 - -
Tpr7g0268 231 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0268 Tpr-Chr7 2210509 2211204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0268 8 92 AP2-EREBP Transcription Factor Family AT1G75490 83.529 1.03e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr7g0268 AP2 1.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0268 - - gmx:100790057 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0268 7 2210509 2211204 Tpr7g0268 7 2210509 2211204 ECH
Tpr1g3823 1 42217192 42218688 Tpr7g0268 7 2210509 2211204 PCT