Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0266 ATGGCTGATAATTCAGGTGGGAGAATGTGGTGCTCTATTCCAGAAAGGTTTCAACTGCATGTGGCCATGTTGGCCCTGCAGTTTGGATATGCTGGTTTCCATGTTGTCTCAAGAGCTGCACTTAATATGGGTGTTAGCAAACTTGTTTTCCCAGTTTACCGCAATATTATTGCTTTTCTTCTCCTTCTTCCTTTTGCTTACTTCTTGGAAAAGAAGGAGAGGCCAGCTATTACTTTAAACTTTCTTTTGCAGTTCTTTCTTCTTGCCCTCGTCGGGATTACAGCCAACCAGGGTTTCTACTTGCTTGGCTTGGACAATACATCTCCAACTTTTGCATCAGCAATTCAAAACTCTGTTCCAGCCATTACATTTCTCATGGCAGTCATACTCAGAATAGAGCAAGTGAGGTTGAACAGAAAGGATGGAATAGGGAAAGTGGCAGGAACATTGTTCTGTGTAGCAGGGGCATCAGTGATTACACTATATAAAGGTCCAACAATATACAGTCCAGTTCCACCACTACACAACAGTGGCAGTAGCAATAGCATGGAAGAGAGTTTAGTAGTGTTTGAATCAATTTCATCAGTTTTGGGAGATGCAAAAGGAAAAAACTGGACCCTTGGATGTTTGTACCTAATAGGACATTGTTTGTCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTCCTTAAGAAGTATCCGGCTCGTCTCTCTGTCACTTCCTATACATGTTTCTTTGGACTTATTCAATTTCTCATTATTGCTTTGATTGTTGAAAGAGATGCTCAGGCTTGGATTTTCCAATCTGGTGGTGAAGTTTTCACTATTTTGTATGCGGGAGTGGTGGCATCAGGAATTGCATTCGCTGTACAGATATGGTGCATTGACAGAGGAGGTCCTGTTTTTGTTGCAGTGTATCAACCTGTTCAAACTCTTGTTGTTGCTATTATGGCTTCTCTTGCTTTAGGAGAAGAATTCTACTTAGGAGGGATAATTGGAGCAGGATTGATAATTGTGGGGTTGTACCTAGTTTTGTGGGGTAAAAATGAAGAAAAGAAATTTGCAAGGGAGGTGGCAGCAATCACTTCATCCACTCAGCAGGAACATAGTAGTAGTAGTAGCATCATCAGATCCTCAAGCCATCATGCCAAAACATCATCACTTGCTCAACCACTTCTTCCTTCATCAACGGAAAATGTTTGA 1203 0.4173 MADNSGGRMWCSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGIGKVAGTLFCVAGASVITLYKGPTIYSPVPPLHNSGSSNSMEESLVVFESISSVLGDAKGKNWTLGCLYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLIQFLIIALIVERDAQAWIFQSGGEVFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAIMASLALGEEFYLGGIIGAGLIIVGLYLVLWGKNEEKKFAREVAAITSSTQQEHSSSSSIIRSSSHHAKTSSLAQPLLPSSTENV* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0266 400 MobiDBLite consensus disorder prediction 369 400 - -
Tpr7g0266 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Tpr7g0266 400 PANTHER WAT1-RELATED PROTEIN 12 370 - -
Tpr7g0266 400 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 350 - -
Tpr7g0266 400 PANTHER WAT1-RELATED PROTEIN 12 370 IPR030184 GO:0016021|GO:0022857
Tpr7g0266 400 Pfam EamA-like transporter family 23 160 IPR000620 GO:0016020|GO:0016021
Tpr7g0266 400 Pfam EamA-like transporter family 207 345 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0266 Tpr-Chr7 2193308 2197400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0266 1 400 Nodulin-like Gene Family AT1G75500 73.945 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0266 - - gmx:100786714 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0266 7 2193308 2197400 Tpr7g0266 7 2193308 2197400 ECH
Tpr1g3824 1 42226077 42229127 Tpr7g0266 7 2193308 2197400 PCT