Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0259 ATGAAGATCCAGTGTGACGTGTGTAACAAACACCAAGCTTCTTTGTTCTGCACCGCGGACGAAGCTGCCTTATGCTCCGCCTGCGACCACCGTGTCCATCATGCTAACAAGCTCGCCTCTAAACACCATCGCTTCTCTCTCAACGACCTCAATTCTCCCAACCATTTACCTCTCTGTGATATTTGTCATGAAAGAAAAGGATTTGTTTTTTGTCAAGAAGATAGAGCGATTGTATGCAAAGATTGTGATTTGAAGACTCATGCTGCCAATGAACACACAAAGAAGCATAATAGGTTTCTTCTGAGTGGGATTAAACTGCTCTCTCATGCTGATACATCACTCTCTCCTGCTCCTCCTGCTCCTCCTGCTGCTATTAGCAAGGGTAGTTTGGTAATTACAAACAATGAAGAAGCTGGTAGTTTCACCATATCGGAGTACTTGATAAACACTATCCCTGGTTGGAAGTTTGAAGATTTCATTGATTCCTCTTCTTCTTTTTCTTCTTCTCCTTTTGATACTATCTTGGTTCCTCAAGCACCACAGTCTTCTTTTTATTATTCTGAAAAAATGGATAGCAGATAA 582 0.4158 MKIQCDVCNKHQASLFCTADEAALCSACDHRVHHANKLASKHHRFSLNDLNSPNHLPLCDICHERKGFVFCQEDRAIVCKDCDLKTHAANEHTKKHNRFLLSGIKLLSHADTSLSPAPPAPPAAISKGSLVITNNEEAGSFTISEYLINTIPGWKFEDFIDSSSSFSSSPFDTILVPQAPQSSFYYSEKMDSR* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0259 193 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 167 - -
Tpr7g0259 193 Pfam B-box zinc finger 4 42 IPR000315 GO:0008270
Tpr7g0259 193 Gene3D Classic Zinc Finger 1 98 - -
Tpr7g0259 193 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 167 - -
Tpr7g0259 193 CDD Bbox1_BBX-like 5 47 - -
Tpr7g0259 193 CDD Bbox1_BBX-like 58 101 - -
Tpr7g0259 193 ProSiteProfiles Zinc finger B-box type profile. 54 101 IPR000315 GO:0008270
Tpr7g0259 193 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Tpr7g0259 193 SMART bboxneu5 54 101 IPR000315 GO:0008270
Tpr7g0259 193 SMART bboxneu5 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0259 Tpr-Chr7 2119008 2120185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0259 1 177 C2C2-CO-like Transcription Factor Family AT1G75540 49.309 1.70e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g0259 zf-B_box 2.1e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0259 - - gmx:100785978 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0259 7 2119008 2120185 Tpr7g0259 7 2119008 2120185 ECH