Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0254 ATGGCCGAAGAAATTAGCCAAAACGACGTCGCTTCATCTTCCAAATCTAAAAAAAGCTTCTGGTCTTCACTCCGTTGGATTCCCACTTCTACCGATCACATCATCGCCGCCGAGAAACGCCTTCTCTCCATTATCAAGACTGGGTATGTTCAAGAGCGTGTTAATATAGGTTCTGGTCCTCCTGGGTCGAAAGTAAGATGGTTCCGTTCATCGAGTGATGAGCCGCGGTTTCTCAACACTGTTACTTTTGACAGTAAACCTGATGCTCCTACGCTTGTTATGGTTCATGGATATGCTGCTTCCCAAGGTTTCTTCTTTCGCAATTTTGACGCTCTAGCCTCTCGTTTCAGAATCATTGCTGTTGATCAACTTGGTTGGGGTGGATCAAGCAGGCCTGATTTCACATGCAGAAGTACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGAAAAGCCAAAAATCTGAGCAATTTTATACTACTTGGACATTCTTTTGGCGGTTATGTTGCTTCCAAATATGCGCTCAAGCACCCTGAGCATGTACAGCACTTAATTTTGGTGGGACCTGCTGGGTTTACAGAAGAAACAGATCCAAAGACTGAGTTTGTTACAAAGTTTCGAGCAACATGGAAGGGAGCAGTTTTGAACCATCTATGGGAATCTAATTTTACACCTCAAAAAATTGTCAGAGGTTTTGGTCCTTGGGGTCCTAACATGGTCCGCAAATATACAAGTGCTAGGTTTGGTACACGTTCAACCGGGCAAAAACTGACTGACGAGGAATCAAGTTTGCTAACAGATTATGTTTATCATACATTGGCGGCCAAAGCTAGTGGAGAGCTGTGTTTAAAATATATTTTTGCATTTGGAGCATTTGCTAGGATGCCCCTTCTTCGCAGTGCTCCAGAGTGGAAGGTGCCCACCACATTCATATATGGTACTGAAGATTGGATGAATTATGAAGGTGCCCAAGAAGCTCGCAAGCAGATGAAGGTTCCGTGTGAAATTATCAGGGTCCCTCAGGCCGGACATTTTGTGTTCATCGACAACCCAAGTGGCTTCCATTCAGCTGTGCTATATGCTTGTCGAAGGTTTCTTACACCAAATCCGGACAATGAATCTCTTCCTGAAGGGCTGTCCTCTGCATAG 1161 0.4427 MAEEISQNDVASSSKSKKSFWSSLRWIPTSTDHIIAAEKRLLSIIKTGYVQERVNIGSGPPGSKVRWFRSSSDEPRFLNTVTFDSKPDAPTLVMVHGYAASQGFFFRNFDALASRFRIIAVDQLGWGGSSRPDFTCRSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYVASKYALKHPEHVQHLILVGPAGFTEETDPKTEFVTKFRATWKGAVLNHLWESNFTPQKIVRGFGPWGPNMVRKYTSARFGTRSTGQKLTDEESSLLTDYVYHTLAAKASGELCLKYIFAFGAFARMPLLRSAPEWKVPTTFIYGTEDWMNYEGAQEARKQMKVPCEIIRVPQAGHFVFIDNPSGFHSAVLYACRRFLTPNPDNESLPEGLSSA* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0254 386 Pfam alpha/beta hydrolase fold 90 355 IPR000073 -
Tpr7g0254 386 PRINTS Alpha/beta hydrolase fold signature 115 130 IPR000073 -
Tpr7g0254 386 PRINTS Alpha/beta hydrolase fold signature 164 177 IPR000073 -
Tpr7g0254 386 PRINTS Alpha/beta hydrolase fold signature 178 191 IPR000073 -
Tpr7g0254 386 PANTHER BNAA01G13630D PROTEIN 9 373 - -
Tpr7g0254 386 Gene3D alpha/beta hydrolase 77 366 IPR029058 -
Tpr7g0254 386 PANTHER RE40534P-RELATED 9 373 - -
Tpr7g0254 386 PRINTS Epoxide hydrolase signature 115 130 IPR000639 GO:0003824
Tpr7g0254 386 PRINTS Epoxide hydrolase signature 164 177 IPR000639 GO:0003824
Tpr7g0254 386 PRINTS Epoxide hydrolase signature 178 191 IPR000639 GO:0003824
Tpr7g0254 386 PRINTS Epoxide hydrolase signature 310 326 IPR000639 GO:0003824
Tpr7g0254 386 PRINTS Epoxide hydrolase signature 343 365 IPR000639 GO:0003824
Tpr7g0254 386 SUPERFAMILY alpha/beta-Hydrolases 81 363 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0254 Tpr-Chr7 2076732 2081373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0254 70 197 Acyl Lipid Metabolism Gene Families AT1G64670 30.657 1.80e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0254 - - gmx:100791981 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0254 7 2076732 2081373 Tpr7g0254 7 2076732 2081373 ECH
Tpr1g3837 1 42392082 42396060 Tpr7g0254 7 2076732 2081373 PCT