Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0244 ATGAATCAGGTGAGGAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTTGGAAGGACTGACACGGCTTCTGTATTGTCTGAAGCCATTGGATACATCAAGTTTCTTCATGGTCAAATTGAGCTGTTGGATGACACTGGCCTAAAAAGAAAGGGTGCTCCAATTCCAAACCAGACTGCAAAAGCGAATAAGGGAAAGAACTTGAGGACTAGAGGGTTGTGCTTAGTCCCTATGTCAAGCCTTTGTCCTGCACACAACATGTTGGAAGCACAAATGGAGCTGAATATTTGCAGGGAGGCGTGGAAATTAGTTGAAGCGAGTTAG 342 0.4474 MNQVRKEKLGDRITALHQLVSPFGRTDTASVLSEAIGYIKFLHGQIELLDDTGLKRKGAPIPNQTAKANKGKNLRTRGLCLVPMSSLCPAHNMLEAQMELNICREAWKLVEAS* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0244 113 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 42 IPR011598 GO:0046983
Tpr7g0244 113 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 51 IPR036638 GO:0046983
Tpr7g0244 113 CDD bHLH_AtbHLH_like 3 49 IPR045239 -
Tpr7g0244 113 PANTHER TRANSCRIPTION FACTOR BHLH103 4 90 - -
Tpr7g0244 113 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 90 - -
Tpr7g0244 113 Gene3D - 1 59 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0244 Tpr-Chr7 1986035 1986909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0244 5 89 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 56.044 2.55e-25 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0244 - - sspl:121802096 109.383