Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0192 ATGACTCCTCAGAAATCAGACTCCGTCGTTTACCTTCACGGTAACCTCGATTTGAAGATCGTTGAGGCTCGTTATTTACCAAACATGGACATGTTTTCAGAGCGTTTTCGAAGATTCTTCTCCGCTATTAACAAATGCAGCAATTCAATCAGTGGTAAAAACCATCCACCACGTCATCATCATCATAAGATAATCACCAGTGATCCATACGTAACCGTTTGTCTCGCCGGTGCTACGGTGGCGCGTACGCGTGTTATTTCAAACTCGCAATCACCGAAATGGGAAGAGCATTTTAAAATTCCTTTGGCTCATCCTGTTTCTCAGGTTGAATTATACGTGAAAGATAATGACATGTTTGGCGCTGAATTGATCGGAATCGCAACCGTTTCTGCTAAGAGGATCTTATCAGGTGAATATATCAGTGATTGGTTTCCGATTATAGGTTCTGGCGGTAAACCTCCAAAACCTGATTGCGCGGTTTTTATTGAGATGAAATTCACCAGGTGTGATGATAATCCTCTTTACCGTTCCGGCATTGTGCCTGATCTGGAGAGGTTTTCGGTTCGGGATTCGTATTTTCCTGTTCGGAAAGGAGGATCGGTGACGCTGTATCAAGATGCACACGTTCCGGATTCGATGTTGCCGGGGATTGAATTGGATGATGGTGTTGAATTTCAGCAGGGGAAATGTTGGGAAGATATTTGTCACGCAATATTGGAAGCACATCATATGGTGTATATTGTTGGTTGGTCAATTTACCATAAGGTGAAGCTTGTTAGAGAACCAACAAAACCATTACCAAGTGGTGGAAATTTGAATTTGGGGGAATTACTCAAGTATAAATCACAAGAAGGTTTGCGAGTTTTACTGTTGGTTTGGGATGATAAAACTTCACACAGCAAATTTTTCATCAATACGAATGGAATAATGCAGACTCATGATGAAGAAACTCGAAAGTTTTTCAAGCATTCTTCAGTTACATGTGTGTTATCACCACGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAGCAGGTTGTCGGAACACTTTTTACGCACCATCAGAAATGTGTGATCGTTGATACCCAAGCACATGGCAATAATCGGAAGATAACCGCATTTATAGGTGGTCTAGATCTTTGTGATGGCCGTTATGATACACCTGAGCATAGAATTTTCCGTGATTTGGACACTGTTTATAAGGATGATTTTCATAATCCCACATTTGTGGAAGGAACCAAGTGTCCAAGGCAACCATGGCATGATCTGCATTGCAAAATTGAAGGGCCCGCTGCATATGATATACTCACTAATTTTGAGCAGCGATGGAAGAAAGCCACCAAATGGTCTGAGTTGGGTCAAAAATTCAAAAGAGTATCTCACTGGCATGATGATTCTTTGATTAAGTTAGAACGCATCTCTTGGATTCTTAGTCCTTCTGAATCAATGCCAAATGATGATCCTGAATTATGGGTTTCAAAGGAAGATGACCCTGAAAATTGGCATGTTCAGGTTTTTCGATCCATAGATTCAGGCTCTTTGAAAGGATTTCCTAAGAATACATATGAAGCCGGGGCTCAGAATCTTGTTTGTGCTAAAAATTTGGTCATAGATAAGAGTATTCAAACAGCTTACATACATGCCATCAGATCCGCTCAGCATTTTATCTATATTGAGAATCAATACTTCATTGGATCATCCTTTGCTTGGCCATCTTACAAAGAAGCAGGTGCTGATAACTTAATTCCAATGGAGTTGGCACTAAAGATTGTCAGTAAGATCAGATCCCGGGAGAGATTTACTGTTTATATTGTCATTCCAATGTGGCCCGAAGGCGTCCCTTCTTCTGCCGCCGTGCAAGAAATGCTCTATTTTCAGGGACAAACTATGCAAATGATGTATGAAATCATAGCTCGGGAATTGAAATATATGAAACTTGACAATAGCCATCCACAAGATTACCTCAATTTTTACTGTCTTGGTAACCGAGAGAAGTTTGCAGCTGAAGTTTCAAGTCCAAATAATGCACATTGTGATCATGGCGACACGGTTTCAGCTTCACAAAAGTTCCAACGATTTATGATTTATGTACATGCCAAAGGAATGGTTGTGGATGATGAATATGTGATAGTTGGGTCTGCCAATATCAATCAACGATCTTTGGCTGGATCAAGAGATACCGAGATAGCAATGGGCGCATATCAACCCCGTCATACATGGAACAAGAAAATGGGACATCCTCGTGGTCAGGTATATGGGTATAGAATGTCCTTGTGGGCAGAGCACTTAGGGACCATACATGACTGCTTCAACGAGCCTGAAAGTTTGGAATGTGTGGAGAATGTGAACACGATTGCTAAAGAAAACTGGAAAAAGTATACAGCTGATGATTTTAAGCCATTGCAAGGGCACATTATGCAATATCCCATCAAAGTGAATGCAGATGGGAAAGTATGTTCTTTACCTGGATTTGAGTATTTCCCAGATGTCGGTGGCAAGGTGCTAGGTTGCCGTTCTACCTTTCCCGATGCTCTAACTACATAG 2544 0.4116 MTPQKSDSVVYLHGNLDLKIVEARYLPNMDMFSERFRRFFSAINKCSNSISGKNHPPRHHHHKIITSDPYVTVCLAGATVARTRVISNSQSPKWEEHFKIPLAHPVSQVELYVKDNDMFGAELIGIATVSAKRILSGEYISDWFPIIGSGGKPPKPDCAVFIEMKFTRCDDNPLYRSGIVPDLERFSVRDSYFPVRKGGSVTLYQDAHVPDSMLPGIELDDGVEFQQGKCWEDICHAILEAHHMVYIVGWSIYHKVKLVREPTKPLPSGGNLNLGELLKYKSQEGLRVLLLVWDDKTSHSKFFINTNGIMQTHDEETRKFFKHSSVTCVLSPRYASSKLSIFKQQVVGTLFTHHQKCVIVDTQAHGNNRKITAFIGGLDLCDGRYDTPEHRIFRDLDTVYKDDFHNPTFVEGTKCPRQPWHDLHCKIEGPAAYDILTNFEQRWKKATKWSELGQKFKRVSHWHDDSLIKLERISWILSPSESMPNDDPELWVSKEDDPENWHVQVFRSIDSGSLKGFPKNTYEAGAQNLVCAKNLVIDKSIQTAYIHAIRSAQHFIYIENQYFIGSSFAWPSYKEAGADNLIPMELALKIVSKIRSRERFTVYIVIPMWPEGVPSSAAVQEMLYFQGQTMQMMYEIIARELKYMKLDNSHPQDYLNFYCLGNREKFAAEVSSPNNAHCDHGDTVSASQKFQRFMIYVHAKGMVVDDEYVIVGSANINQRSLAGSRDTEIAMGAYQPRHTWNKKMGHPRGQVYGYRMSLWAEHLGTIHDCFNEPESLECVENVNTIAKENWKKYTADDFKPLQGHIMQYPIKVNADGKVCSLPGFEYFPDVGGKVLGCRSTFPDALTT* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0192 847 SUPERFAMILY Phospholipase D/nuclease 529 779 - -
Tpr7g0192 847 SMART C2_3c 15 143 IPR000008 -
Tpr7g0192 847 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 150 IPR035892 -
Tpr7g0192 847 ProSiteProfiles C2 domain profile. 1 144 IPR000008 -
Tpr7g0192 847 Pfam Phospholipase D Active site motif 694 720 IPR001736 GO:0003824
Tpr7g0192 847 Pfam Phospholipase D Active site motif 350 384 IPR001736 GO:0003824
Tpr7g0192 847 Pfam Phospholipase D C terminal 768 837 IPR024632 -
Tpr7g0192 847 SUPERFAMILY Phospholipase D/nuclease 190 454 - -
Tpr7g0192 847 Gene3D Endonuclease Chain A 513 741 - -
Tpr7g0192 847 Pfam C2 domain 14 146 IPR000008 -
Tpr7g0192 847 SMART pld_4 349 384 IPR001736 GO:0003824
Tpr7g0192 847 SMART pld_4 693 720 IPR001736 GO:0003824
Tpr7g0192 847 CDD C2_plant_PLD 8 167 - -
Tpr7g0192 847 PANTHER PHOSPHOLIPASE D 6 846 IPR015679 -
Tpr7g0192 847 PANTHER PHOSPHOLIPASE D 6 846 - -
Tpr7g0192 847 PIRSF PLD_plant 1 847 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tpr7g0192 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 693 720 IPR001736 GO:0003824
Tpr7g0192 847 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 349 384 IPR001736 GO:0003824
Tpr7g0192 847 Gene3D C2 domain 9 165 IPR035892 -
Tpr7g0192 847 Gene3D Endonuclease Chain A 223 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0192 Tpr-Chr7 1616410 1623539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0192 1 676 Phospholipase D Gene Family (Wang group) AT4G35790 66.859 0.0 970
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0192 K01115 - gmx:100795859 1478.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0192 7 1616410 1623539 Tpr7g0192 7 1616410 1623539 ECH