Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0164 ATGGAGGCACCACCCTTTTCCAACTCAGAAGAGGATGAGTCTTTGTTTGAATACCTCAATAGTCTATCTCCTTTAAAGACCAAAAAGCGTGTTGAAGCTACTCAGACTTTGAACTCACTTGGCATGGATTATTCTCTTCTCGCATCACCTGATGCAACCATTTACGAGGAATCCACAGTCCTCATGAGGAATTACATTTTGAACACATCAGAGCCTCAAGTTTCATCTGAAGAAGCTCTTACTGATCCTGCTCATGCATGCCATTACTCACTTGAGTCATCTAGTCAACATACAAAGATCGAGCTTCCACAAGCTATGCAATATAATCCTTGTAGCTCGGAACAACGTCCTCTAATTTCAACTGAAGAGGCTAAATGGGCTCTTGAGTTACTTGGCAAGCAAGTTCCAAATGGTACCGATGTACAAGATGACTATATGGAAGATTCAGTTGAGGGTGGAACATATATTCGGGAAGTAGGTCAGGTTGAGGCAAACATTGAAGGAGCAGATTGTGATTACAATAACTTAATTAGTATAACACAATTTGTGAATCTGCTGCCACAATCTACTACTAACAGTAATTATAAAATGCAAACTGTTGAACCTGTTGCTTCTAGTTCATATCCTTCTGAACCTATAGCTGCAACAGACAGAAATCAAACATGGAACAATCTTGCCAATGTTGCTTTAAGGGATAGCAATCCAATTGCGAGAGGGGTCGATGAGCTTGCATGTATAATGAGGCCCTATCAAAGCTATCAGCCTGAGATGAGCAGTTTGCAAAGGAACAACTACGTTTATACTTCAAAATCTGATGAGATGAATGCTATTATAAAGGAAAATCCATTGCTTCCTAGAAAAAACACTAGTGATTTACAGATGTGTGTTTTGCCAAGAAATGATTTTTACTTAAATGTGCATCCTGCCTTGAATAATTACAAAGCAATAGAAAATGAAAAGATGTCTTCTAGAAGGAAACCTGAATCGCCGAGCTGCACTTCTTCTTTGCATTTTTCTGCAAGTCAAGTGCATCACCTATCGCCTGTCCCTGCACCAACGGAAAGACATTTGGAGCCATCTGAGAATGATGATTTCACCAAGTCATCAGTTCACATTCCTGGCGAAGATTTCTGTCGGAGCTGTAACCCTGACCTGATGAGTAGAGTGCAATTTAATGAACTAATGAATAAACTATTCGATCAAAACATGAAAAAGACGTCGAAAGTGAAGAGTATAGATTTGATTGGTCTAGTTTCTTCTGGCTCAGAACATGAAATGGAAGGGGAAAGTGCCGATACTAACACCAACGTTCGACTTTACAGAAAATGGTCGGATCTAACTGGCAAAGGAAGGAAATACAGAAACTGTAGATGTAGAAAATCAAGGTGTTTGAAAGATTATTGTGAGTGCTTTGCTTTTGGAGTCAGCTGCATAGGACTTTGCCAGTGTCAAGACTGCATGAATAATAAGTCAGATCTAACTGGAGAAGAAGAGGCATGCAAACAATGTAGATGTATAACATCAAATTGTTTGATACCCAATTGTGAATGCTTTTCTGCTGGAGTCTACTGCACAGGACATTGCTCATGTAAACACTGCTTGAATAATGGAGATAATGAAGATACAATTCTACAAGCTCGCCAGAAGAATGATCCTAAAGTTGAGGACCGGTCCAGCTTCCAGAAAAGAGGATGTGTTTGCAATAAAACAAGTTGCCAGATGAAAAAATGCAAATGTTTTAAGGATGGTGTTGGTTGCTCCCCAATTTGTAAATGTCAAGGGTGCAAAAATATACATGGTAGAAGAAAGGATAGTACAGCTGAAACAAAATCTGAGCTTGAAGAAACAGAAGCAATACAGATTTTCTGGCTATGA 1875 0.3931 MEAPPFSNSEEDESLFEYLNSLSPLKTKKRVEATQTLNSLGMDYSLLASPDATIYEESTVLMRNYILNTSEPQVSSEEALTDPAHACHYSLESSSQHTKIELPQAMQYNPCSSEQRPLISTEEAKWALELLGKQVPNGTDVQDDYMEDSVEGGTYIREVGQVEANIEGADCDYNNLISITQFVNLLPQSTTNSNYKMQTVEPVASSSYPSEPIAATDRNQTWNNLANVALRDSNPIARGVDELACIMRPYQSYQPEMSSLQRNNYVYTSKSDEMNAIIKENPLLPRKNTSDLQMCVLPRNDFYLNVHPALNNYKAIENEKMSSRRKPESPSCTSSLHFSASQVHHLSPVPAPTERHLEPSENDDFTKSSVHIPGEDFCRSCNPDLMSRVQFNELMNKLFDQNMKKTSKVKSIDLIGLVSSGSEHEMEGESADTNTNVRLYRKWSDLTGKGRKYRNCRCRKSRCLKDYCECFAFGVSCIGLCQCQDCMNNKSDLTGEEEACKQCRCITSNCLIPNCECFSAGVYCTGHCSCKHCLNNGDNEDTILQARQKNDPKVEDRSSFQKRGCVCNKTSCQMKKCKCFKDGVGCSPICKCQGCKNIHGRRKDSTAETKSELEETEAIQIFWL* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0164 624 ProSiteProfiles CRC domain profile. 499 600 IPR005172 -
Tpr7g0164 624 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 7 489 - -
Tpr7g0164 624 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 490 616 - -
Tpr7g0164 624 ProSiteProfiles CRC domain profile. 454 491 IPR005172 -
Tpr7g0164 624 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 454 490 IPR005172 -
Tpr7g0164 624 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 501 536 IPR005172 -
Tpr7g0164 624 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 563 597 IPR005172 -
Tpr7g0164 624 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 490 616 IPR044522 GO:0003700
Tpr7g0164 624 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 7 489 IPR044522 GO:0003700
Tpr7g0164 624 SMART CXC_2 451 492 IPR033467 -
Tpr7g0164 624 SMART CXC_2 560 601 IPR033467 -
Tpr7g0164 624 SMART CXC_2 498 539 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0164 Tpr-Chr7 1350888 1354650 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0164 490 617 CPP Transcription Factor Family AT3G22780 39.869 7.57e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tpr7g0164 TCR 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0164 - - mtr:MTR_1g103230 538.88