Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0163 ATGGGAGATGGTGCTGCAGTGACATCATCTGCAACCATGATGGAAGGTCCACCACAAGATGAAAATTCAATGGATTTTGATTACATGAGTGAACTTTTGTTAGATGGTTGTTGGTTGGAAGCTTCCGCGGATGGATCTGAGTTCTTACTGCAAAGTTCTCCTTTTTCCAATCCAATCTTTGACCCTTCATTCTCTTGGCCTTCCTTGGAGAATACTGAGCCACCCCGCAACGAGGATGGGCACGTTGGTATTGAACAAGAAAGTCAGATTATAGTTAATAATGCTGGCAGTAGTGACCGGCAGCAGTGTGAGTTTGAGACTCGTTCGGGTGAAGGGGTTAGTAGGTTGTGGATTCCACCGACGCCTAATCCAGGACCTGGTGGATCTTTCATAACCGAGAAGCTGATAAGAGCCCTCAAGTGGATCAAAGATTTCAATAGGAACAAAGATATGCTTATACAAATATGGGTGCCGGTTAATAGAGGGGATGATAGGCCAATTCTGAGAGCTAATGATCTTCCTTTTTCACTTGAATCAAGGTCTTTAAACCTTGCAAAGTACCGAGAGATCTCTGTAAGATATCAGTTTTCTGTAGAGGAGGAGGACTCGAAGGAGTTGGTGGCGGGTTTGCCTGGTCGAGTTTATAGGGATAAGATTCCTGAGTGGACGCCTGATGTTCGATTCTTCAGGAGTGAAGAGTATCCGCGAGTTGACCATGCTCAAGAGTGTGATATACACGGAACATTAGCGGTTCCGGTGTTTGAACAAGGGAGCAGGACATGTTTGGGTGTTATTGAAGTGGTGATGACTACACAGCAGAGTAACTATGGCCGTGAACTTGAGACTGTTTGCAAAGCGCTCGAGGTTGTTGATCTCAGAAGCTCTGGACATTCAAGTCTTCAGAATGTGAAGGCGTGCGACAAATCCTATGAAACTGCACTACCTGAGATTCAAGAGGTTTTGAGATCTGCATGTGAAATGCACAAATTACCTTTGGCTCAGACTTGGATCTCATGCATCCAACAGGGAAAAGACGGGTGCCGGCACTCCGATGATAATTATGCAAACTGTATATCTCCGGTGGAGTATGCGTGCTATGTTGGTGATTCCTCAGTTAGATTTTTTCACGAGGCTTGCATGGAGCATCACTTGTTAAAAGGTCAAGGTGTTGCCGGGGGTGCTTTCATGACAAACCAACCGTGCTTCTCGGCTGACATAACTTCTTTAAGCAAGACAGATTATCCATTGTCTCATCACGCCAGGTTGTTTGGATTGCGAGCTGCAGTTGCCATACGACTCCGAAGCATCTATAGTACTTCAGATGACTATGTTCTCGAGTTCTTCCTGCCTGTAGATTGCAATGACAGTGAAGAACAGAAAAATATGCTCACATCTTTGTCCATGATTATTCAAAGGGTTTGCCGCAGCTTGCGAGTTATAACAGATAAGGAATTGGATAAAGATAACTTACCATCTAATGAAGTGATGGCCGTTACTGATGGTCGATTTGCTACAAATGCAATCTGGTCGGAATCTCAACACAGGAGGATGGCTGCCTCATTGGGTGGTGAAGAAAAGTTAAGCGAAACAATGAGTAGAAAATTCTCAGAACAAAGGCGGCAACAGGAAACTCTTACTTTAAAAGGAGATCTTGATTGTGGTAGGGCGAGTTCTCCTTCTGTGGAGGGTACTTTCTTGTCAAGTTTGGGAATAAATAGAACTGGAGAGAAAAGACGGGCTAAGGCAGAGAAAACTATCACTCTTCAAGTCCTTAGGCAGTATTTCGCTGGAAGTCTAAAAGATGCTGCGAAAAATATTGGCGTCTGTACCACAACTCTGAAAAGGATCTGCAGGCAACACGGGATAAAGCGTTGGCCTTCTCGGAAGATAAAAAAGGTTGGTCACTCTTTGCAGAAACTTCAACTCGTCATTGACTCAGTTCAGGGTGCTTCTGGTTCATTTCAAATTGATTCCTTCTATTCAAAATTCTCTGATCTATCGTCTCCAAGAACCAGCCTAATCTCAACTCTGAATCAAATCGATAATCAAGTCTCGTTAAGCACTCTGCCAGATCCCGACTCATTAAGCCCCGAAGGTGCATCGAAATCACCCTCATCTTCATGTAGTCAAAGTTCATTTTCAAGCCATTCCTGTTCCAGCATGTCAGAGCAACAACACCGCAAAGGCAATGTTGCTATTGGTAACAAAGATCCATCGGTTGGTGAAGATTCTGTTGATGTTGTGTTGAAGAGAATCAGAAGTGAAGCAGAACTTAAAAGCCTGATTCAAGATAATAAAACAAAGCTCATGCCAAGATCACAAAGTCAGGAAACACTAGGTGAAAACCCGAAAACCGAGCATCACAAATCCTTCTTAAAATCCGCTCCCAAAGCTTCTCAAAAGGAGGATTCTCACAGAGTAAAAGTTACATTTGGAGACGAGAAAACACGGTTTAGGTTGCCAAAGAACTGGGGTTATGAAGATCTTGTGCAGGAAATTGCTAGAAGATTTAATGTAAGTGAAATGAGCAAATTCGATATCAAATATTTGGACGATGATTATGAATGGGTATTACTAACTTGTGACGCAGATTTGGAGGAGTGCATTGATGTTTGTCAATCTTCTGAGACTAGTACCATCAAACTTTGTCTGCAACCCTCCAGTAATTTTATCAGGAGTTCTTTAGAATTTAGATAG 2697 0.4305 MGDGAAVTSSATMMEGPPQDENSMDFDYMSELLLDGCWLEASADGSEFLLQSSPFSNPIFDPSFSWPSLENTEPPRNEDGHVGIEQESQIIVNNAGSSDRQQCEFETRSGEGVSRLWIPPTPNPGPGGSFITEKLIRALKWIKDFNRNKDMLIQIWVPVNRGDDRPILRANDLPFSLESRSLNLAKYREISVRYQFSVEEEDSKELVAGLPGRVYRDKIPEWTPDVRFFRSEEYPRVDHAQECDIHGTLAVPVFEQGSRTCLGVIEVVMTTQQSNYGRELETVCKALEVVDLRSSGHSSLQNVKACDKSYETALPEIQEVLRSACEMHKLPLAQTWISCIQQGKDGCRHSDDNYANCISPVEYACYVGDSSVRFFHEACMEHHLLKGQGVAGGAFMTNQPCFSADITSLSKTDYPLSHHARLFGLRAAVAIRLRSIYSTSDDYVLEFFLPVDCNDSEEQKNMLTSLSMIIQRVCRSLRVITDKELDKDNLPSNEVMAVTDGRFATNAIWSESQHRRMAASLGGEEKLSETMSRKFSEQRRQQETLTLKGDLDCGRASSPSVEGTFLSSLGINRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGVCTTTLKRICRQHGIKRWPSRKIKKVGHSLQKLQLVIDSVQGASGSFQIDSFYSKFSDLSSPRTSLISTLNQIDNQVSLSTLPDPDSLSPEGASKSPSSSCSQSSFSSHSCSSMSEQQHRKGNVAIGNKDPSVGEDSVDVVLKRIRSEAELKSLIQDNKTKLMPRSQSQETLGENPKTEHHKSFLKSAPKASQKEDSHRVKVTFGDEKTRFRLPKNWGYEDLVQEIARRFNVSEMSKFDIKYLDDDYEWVLLTCDADLEECIDVCQSSETSTIKLCLQPSSNFIRSSLEFR* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0163 898 MobiDBLite consensus disorder prediction 685 729 - -
Tpr7g0163 898 ProSiteProfiles RWP-RK domain profile. 572 653 IPR003035 -
Tpr7g0163 898 PANTHER PROTEIN NLP8 21 894 IPR045012 GO:0003700
Tpr7g0163 898 SMART PB1_new 804 887 IPR000270 GO:0005515
Tpr7g0163 898 MobiDBLite consensus disorder prediction 763 806 - -
Tpr7g0163 898 ProSiteProfiles PB1 domain profile. 804 887 IPR000270 GO:0005515
Tpr7g0163 898 SUPERFAMILY CAD & PB1 domains 796 889 - -
Tpr7g0163 898 PANTHER PROTEIN NLP4 21 894 - -
Tpr7g0163 898 MobiDBLite consensus disorder prediction 781 806 - -
Tpr7g0163 898 MobiDBLite consensus disorder prediction 1 22 - -
Tpr7g0163 898 Pfam RWP-RK domain 585 633 IPR003035 -
Tpr7g0163 898 Gene3D - 800 887 - -
Tpr7g0163 898 MobiDBLite consensus disorder prediction 766 780 - -
Tpr7g0163 898 Pfam PB1 domain 805 886 IPR000270 GO:0005515
Tpr7g0163 898 CDD PB1_NLP 805 886 IPR034891 -
Tpr7g0163 898 MobiDBLite consensus disorder prediction 685 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0163 Tpr-Chr7 1331547 1336982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0163 19 889 NLP Transcription Factor Family AT1G20640 48.982 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr7g0163 PB1 5.1e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0163 - - gmx:100790922 1241.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0163 7 1331547 1336982 Tpr7g0163 7 1331547 1336982 ECH