Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0158 ATGGGTTGTTTTTCTTGCTTTGCTCCTCGTCGGAGCAAAAAAGATGTTAGTAGGGTTCAAGTTGATAATGCTTCTCGATCTATTCATACTCAAGGACATGGTGGAAAGAATGTTTCAGAGAGTGAAAGGAAGAAAAAATATTCAGAGGAAAAGGGGAAGAGTGTGAGGACTGGCAAAAGCAATGCTGCAGCAGCTAGTTTCGGTTTTCGCGAGCTTGCATTAGCTACACAGGGTTTTAAGGAAGTTAATTTGATCGGAGAAGGTGGTTTTGGAAAAGTTTTTAAGGGCCGGCTTCCGACCGGCGAGCTTGTTGCTGTAAAACAATTAAGTCATGATGGTCAACAAGGTTTTCAAGAATTTGTGACTGAGGTTCTTATGCTAAGTCTGCTACATCATTCTAATCTTGTTAAGTTGATTGGCTATTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAATACATGCCGATGGGATCTCTCGAGGATCATCTTTTTGAGGTTCCCCCAGACAAAGAACCTCTAAGTTGGAGTACTCGAATGAAGATTGCTGTTGGAGCAGCTCGGGGCATTGAGTATCTCCATTGTAAAGCAGACCCGCCTGTTATATATCGAGACGTGAAATCTGGTAACATCTTATTAGACAGTGACTTTAGCCCAAAACTGTCAGATTTCGGGCTTGCTAAACTAGGACCTGTTGGAGACAATACTCATGTTTCAACCAGAGTGATGGGTACATATGGCTACTGTGCACCAGAGTATGCGATGAGTGGAAAATTAACCCTCAAATCTGACATCTACAGCTTTGGTGTGGTTTTGTTGGAGTTGATCACTGGACGCAGGGCAATAGATACAAGTAGAAAACCTGGAGAGCAAAACTTAATTACATGGTCTCGCCCATATATTAGCGACCGGAGAAAGTTTGTACACATGGTTGACCCTCTTTTGCAAGGACGCATCCCCCCCCGCAGTTTGCAACAAGCAATTGCTATAACTGCTATGTGTCTCCAGGAGCAACCAAAAGTCCGTCCACTCATCAGTGATATTGTTGTTGCACTGGAATACCTAGTTTCTCAGAGTTCCCCTGAAGTCAATGGACATGCTATTCACAGCCCACTGCTGCGATCAATTCCCGAAATGCACAGAAGTTAA 1149 0.4343 MGCFSCFAPRRSKKDVSRVQVDNASRSIHTQGHGGKNVSESERKKKYSEEKGKSVRTGKSNAAAASFGFRELALATQGFKEVNLIGEGGFGKVFKGRLPTGELVAVKQLSHDGQQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFEVPPDKEPLSWSTRMKIAVGAARGIEYLHCKADPPVIYRDVKSGNILLDSDFSPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDTSRKPGEQNLITWSRPYISDRRKFVHMVDPLLQGRIPPRSLQQAIAITAMCLQEQPKVRPLISDIVVALEYLVSQSSPEVNGHAIHSPLLRSIPEMHRS* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0158 382 Gene3D Transferase(Phosphotransferase) domain 1 155 369 - -
Tpr7g0158 382 SMART serkin_6 79 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0158 382 MobiDBLite consensus disorder prediction 36 55 - -
Tpr7g0158 382 CDD STKc_IRAK 85 353 - -
Tpr7g0158 382 ProSitePatterns Protein kinases ATP-binding region signature. 85 107 IPR017441 GO:0005524
Tpr7g0158 382 PANTHER OS07G0668900 PROTEIN 1 360 - -
Tpr7g0158 382 ProSiteProfiles Protein kinase domain profile. 79 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0158 382 Pfam Protein kinase domain 79 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0158 382 MobiDBLite consensus disorder prediction 21 35 - -
Tpr7g0158 382 MobiDBLite consensus disorder prediction 8 55 - -
Tpr7g0158 382 PANTHER OS07G0668900 PROTEIN 1 360 - -
Tpr7g0158 382 Gene3D Phosphorylase Kinase; domain 1 37 154 - -
Tpr7g0158 382 SUPERFAMILY Protein kinase-like (PK-like) 65 353 IPR011009 -
Tpr7g0158 382 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0158 Tpr-Chr7 1274561 1278295 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0158 1 355 Glycoside Hydrolase AT3G07070 58.939 2.25e-150 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Tpr7g0158 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0158 - - gmx:100796595 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0158 7 1274561 1278295 Tpr7g0158 7 1274561 1278295 ECH