Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0155 ATGAAAGGAGGAAAGTCCAAGGGTGAATCGAAGAAAGCTGATGCTAAGCTTGCTGTGAATAAGAAGGCTGCTCCCGCTACTAAGGGCGGAAGGAAACCAGCCAAGGGAAAGGAACCAAAGGACCCTAACAAGCCAAAGAGACCTGCAAGTGCTTTCTTCATTTTCATGGAGGAGTTTAGGAAGCAGTTTAACAAGGAAAACCCTGACAACAGAGCTGTGTCTGCTGTGGGCAAAGCTGCTGGAGCAAAATGGAAGTCGTTGTCTGATGCTGATAAAGCACCATATGCTGCAAAAGCTGAAAAGAGAAAGGCTGAATATGAGAAGGTCTTGAGGGCTTATAACAAGAAACAGGCTGAAGGTCCAGCTGCTGCTGATGAAGAAGAAGAATCCGAGAAATCAGAATCTGAGGTGCATGATGAGAATGATGATGATGATGAGGAGGGCAGTGATGAGGAGGATGATGACCAGTAG 471 0.4628 MKGGKSKGESKKADAKLAVNKKAAPATKGGRKPAKGKEPKDPNKPKRPASAFFIFMEEFRKQFNKENPDNRAVSAVGKAAGAKWKSLSDADKAPYAAKAEKRKAEYEKVLRAYNKKQAEGPAAADEEEESEKSESEVHDENDDDDEEGSDEEDDDQ* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0155 156 Gene3D High mobility group box domain 29 140 IPR036910 -
Tpr7g0155 156 Coils Coil 96 116 - -
Tpr7g0155 156 PANTHER HIGH MOBILITY GROUP B PROTEIN 2-RELATED 1 155 - -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 94 114 - -
Tpr7g0155 156 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 1 18 - -
Tpr7g0155 156 Coils Coil 123 143 - -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 65 156 - -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 1 51 - -
Tpr7g0155 156 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 155 IPR031061 -
Tpr7g0155 156 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 31 45 - -
Tpr7g0155 156 MobiDBLite consensus disorder prediction 124 156 - -
Tpr7g0155 156 SMART hmgende2 44 115 IPR009071 -
Tpr7g0155 156 CDD HMGB-UBF_HMG-box 45 111 - -
Tpr7g0155 156 SUPERFAMILY HMG-box 34 123 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0155 Tpr-Chr7 1241802 1243717 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Tpr7g0155 HMG_box 1.3e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0155 K25507 - lang:109352139 167.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0155 7 1241802 1243717 Tpr7g0155 7 1241802 1243717 ECH