Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0153 ATGGAAACAGAGAATCATAATTCCTCAAAATCAAACGGTATTATTATTGGAGGAGGTGGAGGAAGCAACCTTTATGTGAAAGTGATGACCGATGAACAATTGGAACTTCTCAGACAACAAATTTCTGTCTACACCACCATTTCTGACCAGCTTGTTCAGATGCATAAATCCATCACCACTCAACACGACCTTGCAGGACTAAGGTTGGGTAATTTGTACTGTGATCCACTGATGGCATGCTCTGGACACAAGATAACATCTAGGCAGCGTTGGACACCGACGCCTATCCAGCTTCAAATACTCGAGCGGATTTTCGATGAAGGCAATGGAACTCCCTCTAAACAGAAGATCAAAGATATAACCAATGAACTCGGGCAACACGGCCAAATATCCGAGACTAATGTTTATAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGAAAACAATTGGTTCCTACAACAAATCAATCTGAACCAGAGCCAGAGACAGAAGTTGAGTCTCCAAAAGAGAACAAAACACACGAAGAATGCGACCGTGTTCAATTCTTGGAGAATTTATCACCTCATAGTATCAAGGATATGTACATTCAAAGTCCTGATATAGGATTTGAGCACTTGTTGAGTAAAATTGAAGTTTCAGGCTCCTATAGTTCGTATTTTCTTTGA 669 0.4081 METENHNSSKSNGIIIGGGGGSNLYVKVMTDEQLELLRQQISVYTTISDQLVQMHKSITTQHDLAGLRLGNLYCDPLMACSGHKITSRQRWTPTPIQLQILERIFDEGNGTPSKQKIKDITNELGQHGQISETNVYNWFQNRRARSKRKQLVPTTNQSEPEPETEVESPKENKTHEECDRVQFLENLSPHSIKDMYIQSPDIGFEHLLSKIEVSGSYSSYFL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0153 222 ProSiteProfiles 'Homeobox' domain profile. 84 149 IPR001356 GO:0003677
Tpr7g0153 222 MobiDBLite consensus disorder prediction 163 177 - -
Tpr7g0153 222 Pfam Homeodomain 88 148 IPR001356 GO:0003677
Tpr7g0153 222 CDD homeodomain 88 150 IPR001356 GO:0003677
Tpr7g0153 222 MobiDBLite consensus disorder prediction 146 177 - -
Tpr7g0153 222 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 222 IPR044559 GO:0003700
Tpr7g0153 222 Gene3D - 89 152 - -
Tpr7g0153 222 SMART HOX_1 86 153 IPR001356 GO:0003677
Tpr7g0153 222 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 1 222 - -
Tpr7g0153 222 SUPERFAMILY Homeodomain-like 87 150 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0153 Tpr-Chr7 1232987 1234595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0153 1 174 Wox Gene Family AT4G35550 63.128 1.87e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr7g0153 Homeodomain 2e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0153 - - gmx:100820530 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0153 7 1232987 1234595 Tpr7g0153 7 1232987 1234595 ECH