Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0138 ATGACTCGTTCTTTCCGATTTCTCGACGAGCTCAACTCGTCTTCCGAAGATTCCACCGTCGTTGATTCCGATTTCGTCGTTATCCTCGCCGCTCTTCTCTGTGCTCTCATCTGCGTTCTAGGTCTCGTCGCCGTCGCACGTTGCGGTTGTCTTCGTCGCCTACGTCTCCCTTCCCCCGCTCTCGCTTCTCAAACTGCACCTCCTGCTGCAGCAAACAAAGGCGTTAAGAAGAAAGTTCTTCGCTCTTTACCGAAACTCACAGCAACAGAGGAATCCGCAGTGAAATTCTCCGATTGCGCTATTTGTTTAAGCGAATTCACCGCCGGTGATGAAATTCGAGTGTTACCTCAGTGCGGTCATGGATTCCACGTGTCATGTATTGATTTGTGGCTCAGATCTCATTCTTCGTGTCCATCGTGCCGTCAGATTTTGGTAGTTCCTAGATGCGATAAGTGCGGCGGGATTCCAGCTCCCGCCGCAACAACTACCGGCGCCGCGTCGAGTTCTACACTGGCGCCGGAGGATTGTGAAGCTAGATTAAAGGTAAGGGAGGATGATGGAAACAGATTCTTGCCATAG 579 0.5147 MTRSFRFLDELNSSSEDSTVVDSDFVVILAALLCALICVLGLVAVARCGCLRRLRLPSPALASQTAPPAAANKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVPRCDKCGGIPAPAATTTGAASSSTLAPEDCEARLKVREDDGNRFLP* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0138 192 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Tpr7g0138 192 SUPERFAMILY RING/U-box 80 147 - -
Tpr7g0138 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 145 IPR013083 -
Tpr7g0138 192 CDD RING-H2_PA-TM-RING 98 141 - -
Tpr7g0138 192 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 181 - -
Tpr7g0138 192 SMART ring_2 99 140 IPR001841 -
Tpr7g0138 192 Pfam Ring finger domain 98 141 IPR001841 -
Tpr7g0138 192 PANTHER RING-H2 FINGER PROTEIN ATL8 1 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0138 Tpr-Chr7 1142448 1143403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0138 5 192 C3H Transcription Factor Family AT1G20823 59.799 2.30e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0138 - - gmx:100794614 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0138 7 1142448 1143403 Tpr7g0138 7 1142448 1143403 ECH