Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr7g0138 | ATGACTCGTTCTTTCCGATTTCTCGACGAGCTCAACTCGTCTTCCGAAGATTCCACCGTCGTTGATTCCGATTTCGTCGTTATCCTCGCCGCTCTTCTCTGTGCTCTCATCTGCGTTCTAGGTCTCGTCGCCGTCGCACGTTGCGGTTGTCTTCGTCGCCTACGTCTCCCTTCCCCCGCTCTCGCTTCTCAAACTGCACCTCCTGCTGCAGCAAACAAAGGCGTTAAGAAGAAAGTTCTTCGCTCTTTACCGAAACTCACAGCAACAGAGGAATCCGCAGTGAAATTCTCCGATTGCGCTATTTGTTTAAGCGAATTCACCGCCGGTGATGAAATTCGAGTGTTACCTCAGTGCGGTCATGGATTCCACGTGTCATGTATTGATTTGTGGCTCAGATCTCATTCTTCGTGTCCATCGTGCCGTCAGATTTTGGTAGTTCCTAGATGCGATAAGTGCGGCGGGATTCCAGCTCCCGCCGCAACAACTACCGGCGCCGCGTCGAGTTCTACACTGGCGCCGGAGGATTGTGAAGCTAGATTAAAGGTAAGGGAGGATGATGGAAACAGATTCTTGCCATAG | 579 | 0.5147 | MTRSFRFLDELNSSSEDSTVVDSDFVVILAALLCALICVLGLVAVARCGCLRRLRLPSPALASQTAPPAAANKGVKKKVLRSLPKLTATEESAVKFSDCAICLSEFTAGDEIRVLPQCGHGFHVSCIDLWLRSHSSCPSCRQILVVPRCDKCGGIPAPAATTTGAASSSTLAPEDCEARLKVREDDGNRFLP* | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr7g0138 | 192 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
Tpr7g0138 | 192 | SUPERFAMILY | RING/U-box | 80 | 147 | - | - | |
Tpr7g0138 | 192 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 63 | 145 | IPR013083 | - | |
Tpr7g0138 | 192 | CDD | RING-H2_PA-TM-RING | 98 | 141 | - | - | |
Tpr7g0138 | 192 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 181 | - | - | |
Tpr7g0138 | 192 | SMART | ring_2 | 99 | 140 | IPR001841 | - | |
Tpr7g0138 | 192 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
Tpr7g0138 | 192 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 181 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr7g0138 | Tpr-Chr7 | 1142448 | 1143403 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr7g0138 | 5 | 192 | C3H Transcription Factor Family | AT1G20823 | 59.799 | 2.30e-65 | 197 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr7g0138 | - | - | gmx:100794614 | 256.144 |