Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0134 ATGATGTTAACAATGGAAGAGGTACTTTGTGAACTAAGTGAGCATGAGAAGAAAAATGAACAAGGTTTGCCACCTGGCTTTAGGTTTCATCCAACTGATGAAGAACTCATTACCTTTTATTTGGCTTCTAAGGTTTTCAAAAATACTTTTTTCAACAATGTCAAGTTTGCTGAGGTTGATCTCAATAGATGTGAGCCATGGGAACTTCCAGAAATGGCAAAGATGGGAGAAAAAGAGTGGTATCTATTCAGCTTAAGAGACAGAAAATACCCAACTGGACTGAGAACAAACAGAGCAACCGGTGCTGGTTACTGGAAAGCCACCGGAAAAGACAAAGAAGTTTACAGCTGTAGTAATAGATCTTCCTTATTAGGCATGAAGAAGACTCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTAGATAATCACTTTTCACCTTCTCAATCTCATCATCATCCTCACACCTGCAAGGAAGAGTGGGTGATATGTAGGATATTTCATAAATCAGGAGAAAAGAGAAATTCAATACTCCAACTTCAAAGTGGTAATGCTAATGCTAATTATAATTTAACATCCAAAAAAAGTTGTTTACCACCACCTCCACATTTAATCACAAATCCAACTTCATTTACACAACTAAACCAAAATGACCAATTAATCTCACATTCTCATAACATTTTCCCATTGCAACCATTCCAACCTTCTTTCCAAATCAACCACACATGCAGAAACAACAATCTTCTTCCATCTTCTGAACTACTTTTCAAGTCACAACAAAATTTCAACATGAAACAAACCATTCCAAAATCAGAGGCTACATTCTATGATCAATACCAATCATCACAATCAATTGATGATGCTATTAATCTGAGATGGATTGAAAATAACAATAATAATAATAATTCAAGTAATAATCATAATTTTGAAAACACTTCTTCATTCCCTGTTGAGATGGATGCTGAATTGATTGAATTCTCAGGAGCTGCTACAAATGCTGAATTTAGAGACATGTCAACTTCAACAAACTTTAACAGTAGAATAGGCTTAGATGATGTTCCTATGGGAATAGATTCTTGGTCACAGGCACAACTTGTCTAG 1134 0.3607 MMLTMEEVLCELSEHEKKNEQGLPPGFRFHPTDEELITFYLASKVFKNTFFNNVKFAEVDLNRCEPWELPEMAKMGEKEWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSCSNRSSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDNHFSPSQSHHHPHTCKEEWVICRIFHKSGEKRNSILQLQSGNANANYNLTSKKSCLPPPPHLITNPTSFTQLNQNDQLISHSHNIFPLQPFQPSFQINHTCRNNNLLPSSELLFKSQQNFNMKQTIPKSEATFYDQYQSSQSIDDAINLRWIENNNNNNNSSNNHNFENTSSFPVEMDAELIEFSGAATNAEFRDMSTSTNFNSRIGLDDVPMGIDSWSQAQLV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0134 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 3 13 322 - -
Tpr7g0134 377 Gene3D NAC domain 32 185 IPR036093 GO:0003677|GO:0006355
Tpr7g0134 377 ProSiteProfiles NAC domain profile. 23 180 IPR003441 GO:0003677|GO:0006355
Tpr7g0134 377 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 322 - -
Tpr7g0134 377 SUPERFAMILY NAC domain 18 180 IPR036093 GO:0003677|GO:0006355
Tpr7g0134 377 Pfam No apical meristem (NAM) protein 24 152 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0134 Tpr-Chr7 1092433 1095536 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0134 1 189 NAC Transcription Factor Family AT1G76420 71.958 6.16e-96 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr7g0134 NAM 3.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0134 - - mtr:MTR_3g116070 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0134 7 1092433 1095536 Tpr7g0134 7 1092433 1095536 ECH