Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0129 ATGGCATACCAAAGTTCAGGATCAAGTTCAAGTTCTGGGTTTCAATTGTTGAATTCTCCTTTTGGAGATACTACTTATACTAAGGTTTTTGTTGGTGGATTGGCATGGGAGACTCAAAGTGAAACTATGCGCCGTTACTTTGAACAATTTGGAGATATTCTCGAAGCCGTCGTCATCGCTGACAAGAACACTGGGAGATCCAAAGGCTATGGTTTTGTGACTTTCCGTGATCCTGAAGCTGCCAGGAGAGCCTGTGCCGATCCAAGTCCTGTTATCGACGGTAGAAGAGCTAATTGTAATTTGGCTTCGCTTGGTCGACCACGACCTCCTCCTATCACCTATGGACGGGTAAGACCAGCATCCCCTTATGTTGGAAGTTTGCAACCGGCCCGCGCTGCTTACGTTGGAGGTTATGGCTACCAGCAAGCACTTCCCTATGGCTATCAACAAGGAATGGTTTATCCCCCTTATGGGTATACGGCATATGGACCTGAATACGTCTACCCACAGAGTATGTATGCTGGTCAACAGTACCTTCAGATATATGGTGTGCCTGGTGCAGTGAATACAAATATGTATCCTTATGGACAATTGGGTCAAGCTATTCATGGTGGCCATGGTTATACAGCAATGCAGGGTTATACTGTACCAGCTCATCAGCTAGTTCCCTATGGTGGATCAAATGTTAATGTAATAACAACTTCACCTATGTCTGCCATTCAAGCACCATATCCTAGTGGAATTGCTACACCAGTTCCAGGCCAACCACAATTTATTGTTTCTCCTCAGTTCGTTCAAGGTAGCGGTCCTGACCAAACAACTGGTTAG 828 0.4553 MAYQSSGSSSSSGFQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFGDILEAVVIADKNTGRSKGYGFVTFRDPEAARRACADPSPVIDGRRANCNLASLGRPRPPPITYGRVRPASPYVGSLQPARAAYVGGYGYQQALPYGYQQGMVYPPYGYTAYGPEYVYPQSMYAGQQYLQIYGVPGAVNTNMYPYGQLGQAIHGGHGYTAMQGYTVPAHQLVPYGGSNVNVITTSPMSAIQAPYPSGIATPVPGQPQFIVSPQFVQGSGPDQTTG* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0129 275 CDD RRM_RBM24_RBM38_like 27 102 - -
Tpr7g0129 275 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 85 IPR000504 GO:0003723
Tpr7g0129 275 SMART rrm1_1 28 100 IPR000504 GO:0003723
Tpr7g0129 275 SUPERFAMILY RNA-binding domain, RBD 26 114 IPR035979 GO:0003676
Tpr7g0129 275 Gene3D - 4 111 IPR012677 -
Tpr7g0129 275 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Tpr7g0129 275 PANTHER RNA-BINDING PROTEIN 38-LIKE ISOFORM X1 4 271 - -
Tpr7g0129 275 PANTHER BOULE-RELATED 4 271 IPR037366 GO:0003729
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0129 Tpr-Chr7 1035209 1040009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0129 16 103 C2H2 Transcription Factor Family AT2G19380 42.045 6.88e-17 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0129 7 1035209 1040009 Tpr7g0129 7 1035209 1040009 ECH