Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0127 ATGGAGGGTGGTGAGAGAATTAGTGATGAAATGGATCTGGTTCATTCAGAAAATCGTAATAACAACAATAAGGATCAAAATGCTGTTCATTTGGATCAAGAAATGGTTGATCAAGATGATGCTGATACAACAAATGTCAATTATACCCCTACTCATCAACTTGAACAACGACTCATCACCCCAAAACCTAAAGTTAAGAATGTTACTGAAGTCAATAATAATGTACTAAACACTGCTAACGAGATGACTGCTTATGATGTGACGGGGACGCCTATGGAGCAAGAAGCGTTTATGAAAGAGCTCGAGAGTTTCTATAGATCGAGGTCCTTGGAATTTAAGCCTCCTAAGTTTTATGGGGTGCCATTGAATTGTCTCAAGTTATGGAGATCTGTTATCAAACTAGGTGGCTATGAATTGGTAACTGGATCGAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCACCCTCCTAAGACCTGCACTACAGTCTCATGGACGTTCAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGCATAAGAGAGAGATTGGGGAGGTACAGCTCCCTGTTGGATCACTCCATCAACCTTCAAGTGTGGAAAAAGAGACCGCTGTTTATCAGGCTCCAGGCTCAGGTAGGGCTCGAAGGGATGCGGCAGCACGTGCAATGCAAGGTTGGCATGCCCAGCGTCTTATGGGATATGGTGAGGTTGCTGAATCAGCTGTTAAGGACAAAAACTTCAGTCCCACACCACCAAAACGTGAAAAGAACCTAAAAAATATCGGTGTGATCAACAAACAGAGGACACCATCTGGTATGGACCATGCCGACAAAGCTGCAAACATAGAAGGAGATAGGCAGTTGGTCACAGCAGTAGTGGACATTGGACCCCCAGCTGACTGGGTGAAGATTAATGTGCGGGAAACGAAGGATAGCTTTGAAGTGTATGCACTAGTTCCTGGGCTTCTTCGTGAGGAGGTGCGAGTCCAATCCGATCCAGTTGGAAGGCTTGTTATAACTGGTATGCCAGAACATGTCGACAATCCTTGGGGTATTACCCCCTTCAAAAAGGTTGTGAACTTACCTGCAAGGATTGATCCACTCCAAACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTACGCGTTCCTTTTGAGCAGGGAGCTGTATGA 1179 0.4444 MEGGERISDEMDLVHSENRNNNNKDQNAVHLDQEMVDQDDADTTNVNYTPTHQLEQRLITPKPKVKNVTEVNNNVLNTANEMTAYDVTGTPMEQEAFMKELESFYRSRSLEFKPPKFYGVPLNCLKLWRSVIKLGGYELVTGSKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGEVQLPVGSLHQPSSVEKETAVYQAPGSGRARRDAAARAMQGWHAQRLMGYGEVAESAVKDKNFSPTPPKREKNLKNIGVINKQRTPSGMDHADKAANIEGDRQLVTAVVDIGPPADWVKINVRETKDSFEVYALVPGLLREEVRVQSDPVGRLVITGMPEHVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0127 392 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 291 392 IPR002068 -
Tpr7g0127 392 CDD ARID 93 178 - -
Tpr7g0127 392 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 17 389 - -
Tpr7g0127 392 SUPERFAMILY HSP20-like chaperones 300 387 IPR008978 -
Tpr7g0127 392 SUPERFAMILY ARID-like 88 188 IPR036431 GO:0003677
Tpr7g0127 392 SMART bright_3 92 183 IPR001606 GO:0003677
Tpr7g0127 392 Pfam ARID/BRIGHT DNA binding domain 93 178 IPR001606 GO:0003677
Tpr7g0127 392 CDD ACD_sHsps_p23-like 307 386 - -
Tpr7g0127 392 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 17 389 IPR045147 GO:0006357
Tpr7g0127 392 Gene3D - 289 391 IPR008978 -
Tpr7g0127 392 Gene3D - 92 190 IPR036431 GO:0003677
Tpr7g0127 392 ProSiteProfiles ARID domain profile. 91 182 IPR001606 GO:0003677
Tpr7g0127 392 Pfam Hsp20/alpha crystallin family 307 388 IPR002068 -
Tpr7g0127 392 SMART ARID_2 88 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0127 Tpr-Chr7 1022089 1027993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0127 81 389 ARID Transcription Factor Family AT1G76510 71.935 1.21e-151 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Tpr7g0127 ARID 4.4e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0127 - - lang:109344023 557.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr7g0127 7 1022089 1027993 Tpr7g0127 7 1022089 1027993 ECH