Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0110 ATGGCACCTTCCGCCAATTCCACCGGCGGTGCCGTGCCGTTGCTAACAAACCGAACATTAGGTCTCAAATTCTACTACTTAATCCTCATTTTCGTCGCAATCGTGATCGCAATTATTCTCTTAATCATTCTATGCATTCGCCGGAATCGAAGCTCAAAAAAGAGCAAAATGCGAGTGAAGCATAGTTCCGGCACAATTCCACTTGTTTCTAAGGAGATCGTGGAGGTGATAAAGATCGAACACGTTGTTGATGATGAATCGAAGATTCAGAAGCAAGTAGAGTGTGAGATCGAAGAGTGTAGTAGTGTGTCGGTGGAGTCTCCGTCTCAGAATATAGGTTGGGGACGGTGGTATAGTTTGAAGGAATTGGAGAATGCGACGGATGGATTTGCTGAAGGGAACGTGATCGGAGAAGGAGGTTATGGAATTGTTTACAGAGGAATTTTACAAGACGGTTCTGTGGTTGCTGTGAAAAATCTTCTCAATAATAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCTATTGGAAAAGTGAGGCATAAGAATTTGGTTGGATTAGTTGGATATTGCGCGGATGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAGGACCTGTTAGTCCATTGACTTGGGATATACGAATGAAGATTGCTGTTGGCACTGCAAAAGGGCTAGCCTATTTGCACGAAGGCTTAGAACCCAAAGTTGTTCACCGAGATGTAAAATCGAGCAATATTCTCTTGGACAAAAAATGGAATGCCAAAGTATCAGACTTTGGACTTGCTAAGCTCTTAGGGTCTGGGAAAAGCTATGTGACAACACGTGTCATGGGGACATTTGGATATGTTTCACCCGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTCATGGAGCTAGTTACCGGAAGAAGTCCCATTGATTATTCTAGAGCACCTGCAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAGCAAGTCGTCGCGGGGATGAGCTAGTTGATCCTTTGATCGAGATTCAGCCCTCTCCAAGATCTTTGAAACGAGCTTTACTGGTCTGTCTTCGCTGTATAGATTTGGATGCCAACAAGCGACCAAAGATGGGCCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCCTTTCGTTCTGAACTTCGAACAAGAGAGAAAGATCCTGTTCCCTCTCAAGTTGACCTTTCCAAAAAGATTCCGTATCCAACAAGACACGTGGAGCCCGTATATAAAGCGAGCTGGAGATGA 1341 0.4385 MAPSANSTGGAVPLLTNRTLGLKFYYLILIFVAIVIAIILLIILCIRRNRSSKKSKMRVKHSSGTIPLVSKEIVEVIKIEHVVDDESKIQKQVECEIEECSSVSVESPSQNIGWGRWYSLKELENATDGFAEGNVIGEGGYGIVYRGILQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCADGAQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSGKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELVTGRSPIDYSRAPAEMNLVDWFKGMVASRRGDELVDPLIEIQPSPRSLKRALLVCLRCIDLDANKRPKMGQIVHMLEADDFPFRSELRTREKDPVPSQVDLSKKIPYPTRHVEPVYKASWR* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0110 446 SUPERFAMILY Protein kinase-like (PK-like) 113 421 IPR011009 -
Tpr7g0110 446 PANTHER OS03G0227900 PROTEIN 101 416 - -
Tpr7g0110 446 PANTHER OS03G0227900 PROTEIN 17 92 - -
Tpr7g0110 446 ProSiteProfiles Protein kinase domain profile. 130 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0110 446 Pfam Protein kinase domain 132 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0110 446 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Tpr7g0110 446 SMART serkin_6 130 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0110 446 CDD STKc_IRAK 136 402 - -
Tpr7g0110 446 PANTHER OS01G0323000 PROTEIN 101 416 - -
Tpr7g0110 446 PANTHER OS01G0323000 PROTEIN 17 92 - -
Tpr7g0110 446 Gene3D Transferase(Phosphotransferase) domain 1 206 413 - -
Tpr7g0110 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Tpr7g0110 446 Gene3D Phosphorylase Kinase; domain 1 86 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0110 Tpr-Chr7 863063 867476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0110 116 402 Receptor kinase-like Gene Family AT4G02010 49.141 1.99e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tpr7g0110 Pkinase 6.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0110 - - gmx:100779420 686.026