Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0109 ATGGTGGCAGTGGCAGTGGATCGAAGATTCATATTTTGGTTTGGGTTATTGCTTATCTTTCTATGTTTTGAGGTAACATTTCAACAAATTCAGCCATTAAATTCAACTAAGGAACGAGAATCACTTCTTCAACTAAGGGCTTCTTTGGGTTTAAGAACCAAAGAATGGCCAAGAAAACCAGACCCTTGCTTAATCTGGGATGGTATTACATGTCAAAATGGTCGTGTTGTTGGGATCAATATATCTGGTTTTAGAAGAACAAGAATTGGTAGAAGAAACCCTCAATTTTCTGTTGATGCTTTGGTTAATTTCACTTTATTGCACACTTTTAATGCTTCCAATTTCTATCTTCCTGGTACTATTCCTGATTTCTTTGGTCTTAGGCTCAATTCGCTTCGAGTACTTGATCTTCGTTCGTGTTCTATTGTCAATGCTATTCCTAACACTATTGGGAATTTGACTAGTCTTACTGCTCTTTATCTTTCTGATAATAATCTTACTGGGACTGTTCCTGATAGTTTAGGTCAACTCTCCGCACTTTCGGTTCTTGATCTTTCCGGGAATTCTTTTACTGGAAGTATACCGGAATCTTTTGGTTTTCTTAAAAATCTTTCTTCCCTTGACTTGTCTGCCAATTTTTTTTCCGGGGCTATTCCTTCAGGTATAGGGACTCTTTCCAGGTTACAGTATTTGAACCTTTCTGGTAATGCCCTAAATTCTTTGCCTGCGAAGTTGGGAGGTCTAACTAGCTTGGTTGACCTTGATCTTAGTGAGAATTCTTTCTCAGGCGGCGTTTTTCCTGATTTGAGAGGGTTGGGGAACTTGAAGAGAATGATACTTGGAAACAGTATGCTCAATGGACAATTGCCGGCGGACTTGTTTACTGTTTCATTGCAGTTGCAGACCGTAGTTCTGAGGAAAAATAATTTGACTGGTTCTTTGCCTGATGAGTTGTGGTCTCTGCCGAGATTGACTTTCGTTGACGTGTCTTCCAATAGCTTCAGCGGTCTGCTTCCCAATTCTAGTTCCGATGCTGTCGGTTCTACTGTTGCAGTGCTCAATATTTCTCATAACAAGTTTTATGGAGGTCTCACACCTGTGCTCAGAAGGTTCCGTTTTGTTGATCTTTCAAACAATTATTACGAGGGTAAGGTTCTAGATTTCATGCATAACGTATCAATAGATAGTAACTGCCTACAGAATGCGACAAATCAGAAGTCAACGGTGGTATGTACGTCATTTTATGCTGATAGGGGCCTCACTTTTGACAATTATGGACGACCGAATACGACAAAAACCGCTGGGAAGAGTAATAAAACTAAAATTATATTGGCGGCAGTCTTGGGTGGACTGGGTTTACTTGCACTTTTGGTCTTGCTACTGGTACTGTTGCTTCTGTACACTCGTAAGAGGGGTAATTCAAGTCCAAGGGGAAATGGTGTGGGCCCTGCTCCTGCTGGAGCCAGTCCTCCGCCTCCTGGTGTATCGGTAAACCTTGCAAATGCAGGAGACTCGTTTACGTATCATCAGTTGCTTCAGGCAACAGGAGATTTCAATGATGCAAATCTTATAAAACATGGCCATACTGGGGATTTATTCAATGGTGTTTTAGAAAATGGGGTTCCTGTCGTCATCAAAAGGATCGACATGCGGTCAACGAAAAAGGATGCTTACCTATTGGAATTGGATTTTTTTAATAAGGTTTCTCATCAAAGATTTGTTCCCTTATTAGGTCATTGCTTAGAAAACGAGAACGAGAAGTTCCTGGTTTATAAATATATGCCGAAAGGGGACTTGTCTAATTGCTTATTCTTCAAAAACACCACATCAGAAGATGGTACTTTGCAGTCATTGGACTGGATAACTAGGTTAAAGATTGCTACTGGAGCAGCAGATGCCATATCGTATCTTCATCATGAATGTATTCCACCTATTGTTCACAGAGATATTCAAGCGAGCAGTATACTTCTCGATGACAAGTATGAAGTTCGGTTAGGGAGTCTAAGTGAAGCCTGTGCTCAAGAAGGTGATACCCATCAAAGTAAAATCACCCGGTTTCTGCGACTGCCTCAGTCTTCTGAACAAGGCGCATCTGGTTCATCAACACCAATTTGCGCCTATGATGTTTATTGCTTTGGGAAAGTGTTACTTGAACTGGTGACTGGTAAGCTGGGAATTAGTGCATCCAGTGAGGGTGATTTAAAGGATTGGCTTGATCATATTCTCCCTTGCATTAGCATGTATGACAAGGAGCTTGTGACTAAAATCGTTGACCCGTCTATGGTTGTGGATGAGGATTTCTTAGAAGAAGTGTGGGCAATAGCCATTGTTGCCAGGTCTTGCCTAAACCCGAAACCTTCAAGACGACCTCCAATGAGATATGTTTTGAAGGCTTTAGAAAACCCTTTAAAAGTTGTAAGAGAAGAAAGTTCGAGTTCTGCACGGCTTAAAGCAACCTCTTCTCGAGGCTCTTGGAATGCTACATTGTTTGGTAGCTGGCGTCAGAGTTCGTCTGATGTAACCGCAGTCCCTACAGCTTCCGGTACAAAATTAGAAGGAGCTAGTAGTTTGAAGCTTTCAGCCACTAGTAGTTCATCCTCGCGGAGACGTCATTCAAATGAGATATGCCCTGAGCCATCATTTCGATTACATGATGTTGAGCGGCTGGAGCATGAATAA 2679 0.4158 MVAVAVDRRFIFWFGLLLIFLCFEVTFQQIQPLNSTKERESLLQLRASLGLRTKEWPRKPDPCLIWDGITCQNGRVVGINISGFRRTRIGRRNPQFSVDALVNFTLLHTFNASNFYLPGTIPDFFGLRLNSLRVLDLRSCSIVNAIPNTIGNLTSLTALYLSDNNLTGTVPDSLGQLSALSVLDLSGNSFTGSIPESFGFLKNLSSLDLSANFFSGAIPSGIGTLSRLQYLNLSGNALNSLPAKLGGLTSLVDLDLSENSFSGGVFPDLRGLGNLKRMILGNSMLNGQLPADLFTVSLQLQTVVLRKNNLTGSLPDELWSLPRLTFVDVSSNSFSGLLPNSSSDAVGSTVAVLNISHNKFYGGLTPVLRRFRFVDLSNNYYEGKVLDFMHNVSIDSNCLQNATNQKSTVVCTSFYADRGLTFDNYGRPNTTKTAGKSNKTKIILAAVLGGLGLLALLVLLLVLLLLYTRKRGNSSPRGNGVGPAPAGASPPPPGVSVNLANAGDSFTYHQLLQATGDFNDANLIKHGHTGDLFNGVLENGVPVVIKRIDMRSTKKDAYLLELDFFNKVSHQRFVPLLGHCLENENEKFLVYKYMPKGDLSNCLFFKNTTSEDGTLQSLDWITRLKIATGAADAISYLHHECIPPIVHRDIQASSILLDDKYEVRLGSLSEACAQEGDTHQSKITRFLRLPQSSEQGASGSSTPICAYDVYCFGKVLLELVTGKLGISASSEGDLKDWLDHILPCISMYDKELVTKIVDPSMVVDEDFLEEVWAIAIVARSCLNPKPSRRPPMRYVLKALENPLKVVREESSSSARLKATSSRGSWNATLFGSWRQSSSDVTAVPTASGTKLEGASSLKLSATSSSSSRRRHSNEICPEPSFRLHDVERLEHE* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0109 892 Pfam Leucine rich repeat 203 260 IPR001611 GO:0005515
Tpr7g0109 892 Pfam Leucine rich repeat 131 189 IPR001611 GO:0005515
Tpr7g0109 892 Gene3D Ribonuclease Inhibitor 195 296 IPR032675 -
Tpr7g0109 892 ProSiteProfiles Leucine-rich repeat profile. 227 249 IPR001611 GO:0005515
Tpr7g0109 892 MobiDBLite consensus disorder prediction 473 494 - -
Tpr7g0109 892 SMART LRR_typ_2 272 296 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 177 200 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 153 176 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 201 223 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 129 152 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 225 248 IPR003591 -
Tpr7g0109 892 SMART LRR_typ_2 321 344 IPR003591 -
Tpr7g0109 892 PANTHER RECEPTOR-LIKE PROTEIN 55 191 847 - -
Tpr7g0109 892 PANTHER RECEPTOR-LIKE PROTEIN 55 16 192 - -
Tpr7g0109 892 SUPERFAMILY L domain-like 97 388 - -
Tpr7g0109 892 ProSiteProfiles Protein kinase domain profile. 518 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0109 892 MobiDBLite consensus disorder prediction 844 870 - -
Tpr7g0109 892 Pfam Protein tyrosine and serine/threonine kinase 524 798 IPR001245 GO:0004672|GO:0006468
Tpr7g0109 892 PANTHER BNAA07G03560D PROTEIN 191 847 - -
Tpr7g0109 892 PANTHER BNAA07G03560D PROTEIN 16 192 - -
Tpr7g0109 892 MobiDBLite consensus disorder prediction 844 880 - -
Tpr7g0109 892 SUPERFAMILY Protein kinase-like (PK-like) 499 799 IPR011009 -
Tpr7g0109 892 Gene3D Ribonuclease Inhibitor 35 194 IPR032675 -
Tpr7g0109 892 Gene3D Ribonuclease Inhibitor 297 410 IPR032675 -
Tpr7g0109 892 Pfam Leucine rich repeat N-terminal domain 37 71 IPR013210 -
Tpr7g0109 892 Gene3D Transferase(Phosphotransferase) domain 1 594 822 - -
Tpr7g0109 892 Gene3D Phosphorylase Kinase; domain 1 495 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0109 Tpr-Chr7 852552 858620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0109 38 691 Miscellaneous Gene Families AT2G16250 57.057 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIV Tpr7g0109 PK_Tyr_Ser-Thr 1.2e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0109 - - gmx:100805769 1342.41