Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0105 ATGTTGCACTGTTTGAATACTAATTCAGGGAATCTACCATCTGAAAGTTGCTCTTCCGACATAACTGTTTTGGAAAGACAAAGAGAAAGAATGAAGTGGCAACAACAACAACAACAACATGAACATGAGCAACAAAATGAACAACAACGTTACTTTTCTGGAAATGGATTCAACAGTAATAGTACTGTGTTCTGTTCTTCTCTGCAACAACTAGTTCAGAATTCTCAAGATTCTTCATCACTTCCTCTTTTAATGCCTCTTCAAATCCCAACCGTTGATGTCACTTCTTCATCAATTTCAAGAACTTTCAGCTGTCCACCTCTTCTTCCAGACCCCAAACTCATTGATTCTTCAATTGGAAAACACAATTCTTCTAAAAAGAGAAAATCTGAAAAGCTCAAGGTTGTTGATGAAATTGAAAACAAAGACAAGAGAATCAAAATTGGTGCTGAGGATGGTGAATCTAAGATCACAGGGAACCACAGTGCCAAAAAAAGCAACAGTAATAACAAAGAAAACTGTGGAGCAGAAGATACTTCAAACTCAAAGGAAAATTCAAAAGTCTCTGAGGTTCAAAATCAAAAGACTGATTACATTCATGTTCGCGCGCGTCGCGGTCAAGCCACTGATAGCCATAGCTTAGCTGAAAGAGTGAGAAGGGAAAAGATTAGTGAGAGAATGAAGTATTTACAAGATTTAGTACCAGGGTGTAACAAAATTACAGGAAAAGCCGGAATGCTCGATGAAATCATCAACTATGTTCAGTCTCTTCAAAAACAAGTCGAGTTCTTATCGATGAAATTGGCGACAGTTAATCCAAGACTTGATCACTTCAATATTGATGATCTATTTGAAAAAGAGGTGTTTCCTACTTGTGATGCAAATGCAAGTTTTCCAGCAATTGGAATATCATCAGAATTGAATAATAACAATCCTTATCTTCAATTCAATTCACCACAACAATTTGTTCCTTATGGTGGATTAGATACTGGAATGAACCCTACAGATATAGGACTTAAAAGGAGCATAAGTGCCCCTATATCATTACCTGAAACTTTTATTGATACTTCTTGTTTCTCTCAAATTTTACCTCCTACAACATGGGAAGGTGATTATCAACAAAATCTTTACAACATGAGTTTTGATCAAGCAAGAGCAACAACTTTTCCTTCTCAATCTCAGTTATTTACAGGTCTAGTTGAAAATGGAAATCTAAAGATCGAGATGTAG 1230 0.361 MLHCLNTNSGNLPSESCSSDITVLERQRERMKWQQQQQQHEHEQQNEQQRYFSGNGFNSNSTVFCSSLQQLVQNSQDSSSLPLLMPLQIPTVDVTSSSISRTFSCPPLLPDPKLIDSSIGKHNSSKKRKSEKLKVVDEIENKDKRIKIGAEDGESKITGNHSAKKSNSNNKENCGAEDTSNSKENSKVSEVQNQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQKQVEFLSMKLATVNPRLDHFNIDDLFEKEVFPTCDANASFPAIGISSELNNNNPYLQFNSPQQFVPYGGLDTGMNPTDIGLKRSISAPISLPETFIDTSCFSQILPPTTWEGDYQQNLYNMSFDQARATTFPSQSQLFTGLVENGNLKIEM* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0105 409 Gene3D - 204 279 IPR036638 GO:0046983
Tpr7g0105 409 PANTHER TRANSCRIPTION FACTOR BHLH63-LIKE 19 388 - -
Tpr7g0105 409 CDD bHLH_AtBPE_like 197 283 - -
Tpr7g0105 409 MobiDBLite consensus disorder prediction 160 192 - -
Tpr7g0105 409 MobiDBLite consensus disorder prediction 150 192 - -
Tpr7g0105 409 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 277 IPR036638 GO:0046983
Tpr7g0105 409 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 257 IPR011598 GO:0046983
Tpr7g0105 409 MobiDBLite consensus disorder prediction 28 47 - -
Tpr7g0105 409 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 19 388 IPR024097 GO:0006355
Tpr7g0105 409 SMART finulus 213 263 IPR011598 GO:0046983
Tpr7g0105 409 MobiDBLite consensus disorder prediction 28 53 - -
Tpr7g0105 409 Pfam Helix-loop-helix DNA-binding domain 211 258 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0105 Tpr-Chr7 798870 802519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0105 20 377 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G34530 38.889 9.21e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Tpr7g0105 HLH 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0105 - - gmx:100798855 444.891