Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0088 ATGGGATTTGGTAGAAAAATAATAGTATGCTTGTTGATGATCATCACAATAGGGTGTAATGAGATTGATGGTAGAGAACCTGTGCTGCATAGGGTTGGAGGTGGAAAGTATACTTGGAAACCAAAAATTAACTTCACACAATGGGCAAGTAATGAGCACTTCTACAAGGATGATTGGCTATATTTTGGTTTTGATAAGCACGTTTATAATGTTCTTGAGGTGAACAAAACAAGTTATGAGAAATGTATTGACACTGGCTACATAAACAACATCACTAGAGGAGGAAGAGATGTTTTCCCACTTTCAGAAGAGAGGACATATTACTTTCTATGTGGTAGAGGCTTTTGCTTCCAAGGAATGAAGGTTAAAATAACCGTTGAACCACTTGAGCTACCACTACTACCTCCTCCGACAATCCCGAATAAGGCTGGCTCATCAAGAAAAATGAATTACAGTGTATTCATTATGCTTTTAGTCATCGCTTTGGCGTGGATCTTCGTGTAG 504 0.3849 MGFGRKIIVCLLMIITIGCNEIDGREPVLHRVGGGKYTWKPKINFTQWASNEHFYKDDWLYFGFDKHVYNVLEVNKTSYEKCIDTGYINNITRGGRDVFPLSEERTYYFLCGRGFCFQGMKVKITVEPLELPLLPPPTIPNKAGSSRKMNYSVFIMLLVIALAWIFV* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0088 167 Gene3D - 28 130 IPR008972 -
Tpr7g0088 167 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Tpr7g0088 167 PANTHER EARLY NODULIN-LIKE PROTEIN 5 163 - -
Tpr7g0088 167 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Tpr7g0088 167 PANTHER BLUE COPPER PROTEIN 5 163 IPR039391 GO:0009055
Tpr7g0088 167 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tpr7g0088 167 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0088 Tpr-Chr7 685122 685737 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0088 26 146 Phytocyanin Superfamily AT2G27035 56.198 1.21e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0088 - - gmx:100789719 236.498