Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0076 ATGAAGATCCAGTGTGATGTTTGTGAGAAAGCTGAAGCTTCCATATTCTGTCCTTCAGATGAAGCTGCTCTTTGTAATGGATGTGATCATACTATTCACCATGCAAACAAACTTGCAACCAAACATGCTCGTTTCCCTCTTGTCCACCTTAATTCCAAAGACTACCCTCTTTGTGATATTTGCCAAGAGAGGCGTGGATATCTATTTTGCCAAGAAGACAGAGCGATTCTATGCAGAGAATGTGACCTTCCAATCCATAGAGCAAATGAACATACACAGAAACATAACAGGTTTCTTCTCTCTGGTGTGAAGCTTTCAAACAATTCTTTGGACCTAGATTCATCATCCACTAGTATTGGCTCTGAAACCAGAAACTACTCTAATAGATCATCAAAAGCAAACATAATACCAAGATCAGTTTCCAATGAAAATGTCAGTTCTTCATGCAAGGTTGAAGATAACATGGCTAGTGACACTGGTTCTGTTTCAACAAGCAGCATTTCTGAATACTTGATTGAAACAATACCCGGTTACTGCTTCGAAGACTTTCTCAATGCTTCATTCCCACCTAATGGTTTCTGTAAGAATCAATATTCGGCATTTCAGTACCAAGATCTTAATGCTAGCAAGTTTTTATTTCCTCAACCTCAAGTAACATGTGTACCTCTAGCACAGATTCAATCAGCTCAACTAATTATTCCCACTCCTTCTAATATTGGTTCAGTGGTTGGAGTTAAAGAAATTCCAAAAGTGAACACTTACAAAGGGAACTCAAAATGGAAGAAAGATTATGGATGTACAGTTCCAGTAAATGGTGCTACATTCATAAAAAAATCTAAATACTCTAGATAA 852 0.3756 MKIQCDVCEKAEASIFCPSDEAALCNGCDHTIHHANKLATKHARFPLVHLNSKDYPLCDICQERRGYLFCQEDRAILCRECDLPIHRANEHTQKHNRFLLSGVKLSNNSLDLDSSSTSIGSETRNYSNRSSKANIIPRSVSNENVSSSCKVEDNMASDTGSVSTSSISEYLIETIPGYCFEDFLNASFPPNGFCKNQYSAFQYQDLNASKFLFPQPQVTCVPLAQIQSAQLIIPTPSNIGSVVGVKEIPKVNTYKGNSKWKKDYGCTVPVNGATFIKKSKYSR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0076 283 PANTHER B-BOX ZINC FINGER PROTEIN 20 1 203 - -
Tpr7g0076 283 SMART bboxneu5 4 47 IPR000315 GO:0008270
Tpr7g0076 283 SMART bboxneu5 53 100 IPR000315 GO:0008270
Tpr7g0076 283 Pfam B-box zinc finger 54 92 IPR000315 GO:0008270
Tpr7g0076 283 CDD Bbox1_BBX-like 57 100 - -
Tpr7g0076 283 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Tpr7g0076 283 ProSiteProfiles Zinc finger B-box type profile. 53 100 IPR000315 GO:0008270
Tpr7g0076 283 Gene3D Classic Zinc Finger 1 98 - -
Tpr7g0076 283 CDD Bbox1_BBX-like 5 47 - -
Tpr7g0076 283 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0076 Tpr-Chr7 605412 606947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0076 1 195 C2C2-CO-like Transcription Factor Family AT1G75540 49.515 1.31e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr7g0076 zf-B_box 6.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0076 - - mtr:MTR_3g117320 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3827 1 42293108 42295003 Tpr7g0076 7 605412 606947 PCT