Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0062 ATGGACGGCGGCGAGAACGATTCTCACCAGGGAAGTTCGTTAGTGATTCATCAAACCACCGAACAACTCATCGCCAGGTGCATAGCTCCCGTAAAAAAGGACTTCATTCGTCCACCTCCTGATCGAACAACTTCCTCTCAAAACGACACCGTTTCCATCCCAAACGATAAACCTCCTCTTCTCGCCAAGGAGAAGAAATCTAAACGCCAACTCAAACGCGAACGTCGTCAGGACCAAAAATCAACAAAAAATCTATGTCCAGAAATTTCAAAGTCTGGTGATGTTAATTCGTGTCGTTATCAAGATAAGTGTCGATTCAGTCATGATATTGAAGCCTTCAAGGCACAGAAACCGGATGATTTGGAAGGTGAATGTCCTTTCTTGAAATCCGAAGGTTCTTGCCCTTATGGATTATCATGTAGATTTTTAAGTACTCATGAAGAGGGTAAGCCATTATCTTCTAATGGATTGGAGAAAAGGTCTGAAGTTAATGGTTTTAGCAAAGATGTTCAAAAGCTTTTATGGAAAAATAAAATGACCTACCCCAAAGCTGATGCTAAACTCAAAGCTCTTGGCCTCTTTAGTAAGCCAAAAGTGAATAACTTGGGAAACAAAGATGGTGATGACAAATGTGTTCAGTCTGAGGAAAATGGCTCTGGTGCGGTTACATCTGAATTGGAAAACAATGATGGCGTTGACAAATGCCATCTGTCTGATGATGATGGCTTGTGCGGGGTTGCCGCTGACTCAGGTTCTAAGTTAGAATGTTCTGCAGAAGTTAAAAAAGACGATGACATTACCAGAGAACTTGAATCTGATATAATCTGTCCCCTAAAGAGAAGAAAAACTGAAGAAAATTGTGAAGATGTTGAGACAGAAAATGAAGGTGTGAGTGTTGTTGACCAAAATGTTGATGGAAGCTGCATAAAATCTGAACCAGAGGCAGGACCTGAAGCTATAGCCCCAGAAACTGATCTAAGCTTGAAGTTGCACTCACGTGAAAAGAAGCTTATTGATTTCAGGGAGAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCCTTCCGGAGAGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCAGAATGGGCATTGCTGAGACGCCATTCATCTGAAGAGTTATTTGGTGTACAAATCTGTGGTGCATATCCAGATACTGTGGCGCGGACAGTTGAACTAATAGAAAAGGAATGTACAGTAGATTTCATTGATATAAATATGGGTTGTCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGCATGAAAAGTGTTGTAGAAGTAGCTTCAGGAACAGTCGATATACCAATAACTATCAAGGTACGGACAGCTTATTTTGAAGGGAAGAATCGTATTGACTCTCTGATAGCAGACTTTAGCTCTTGGGGAGCTAGTGCAGTGACAATACATGGCAGGTCACGGCAACAACGCTATAGCAAGCTTGCTGATTGGGATTATGTATATCAGTGTACCAAGAAAGCGCCTAATAATTTGCAAGTAGTGGGTAATGGAGATGTTTTTTCATTTGTAGACTGGAACAACCACAAAACTGAATGCCCTGAACTTGCTACGTGCATGATTGCCCGTGGTGCACTTATTAAACCTTGGTTATTTACGGAGATAAAGGAACAAAGACATTGGGATATCAGTTCTGGTGAGCGGCTAAATATTTTCAAAGATTTTGTGCATTTTGGTCTTCAACATTGGGGTTCAGATACAAAAGGGGTGGAGACAACTAGGCGATTCTTGTTGGAATGGCTTAGCTATACTTGTAGGTACATACCTGTTGGTCTTTTGGAAGTGGTTCCACAACGAATAAATTGGCGTCCACCATCTTACTATGGGCGTGATGACCTTGAGACACTGATGGCTTCAGACTCTGCAGCTGACTGGGTACGTTTATCAGAAATGTTACTTGGCAAAGTTCCAGAAGGCTTTACTTTTGCACCGAAGCATAAATCAAATGCGTACGATAGAGCCGAAAATGGTTAA 2088 0.4162 MDGGENDSHQGSSLVIHQTTEQLIARCIAPVKKDFIRPPPDRTTSSQNDTVSIPNDKPPLLAKEKKSKRQLKRERRQDQKSTKNLCPEISKSGDVNSCRYQDKCRFSHDIEAFKAQKPDDLEGECPFLKSEGSCPYGLSCRFLSTHEEGKPLSSNGLEKRSEVNGFSKDVQKLLWKNKMTYPKADAKLKALGLFSKPKVNNLGNKDGDDKCVQSEENGSGAVTSELENNDGVDKCHLSDDDGLCGVAADSGSKLECSAEVKKDDDITRELESDIICPLKRRKTEENCEDVETENEGVSVVDQNVDGSCIKSEPEAGPEAIAPETDLSLKLHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEELFGVQICGAYPDTVARTVELIEKECTVDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSVVEVASGTVDIPITIKVRTAYFEGKNRIDSLIADFSSWGASAVTIHGRSRQQRYSKLADWDYVYQCTKKAPNNLQVVGNGDVFSFVDWNNHKTECPELATCMIARGALIKPWLFTEIKEQRHWDISSGERLNIFKDFVHFGLQHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLEVVPQRINWRPPSYYGRDDLETLMASDSAADWVRLSEMLLGKVPEGFTFAPKHKSNAYDRAENG* 696
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0062 695 Coils Coil 61 81 - -
Tpr7g0062 695 SUPERFAMILY FMN-linked oxidoreductases 343 656 - -
Tpr7g0062 695 MobiDBLite consensus disorder prediction 205 226 - -
Tpr7g0062 695 MobiDBLite consensus disorder prediction 34 88 - -
Tpr7g0062 695 Gene3D - 75 155 - -
Tpr7g0062 695 ProSitePatterns Uncharacterized protein family UPF0034 signature. 427 445 IPR018517 GO:0008033|GO:0017150|GO:0050660
Tpr7g0062 695 Gene3D Aldolase class I 338 581 IPR013785 -
Tpr7g0062 695 MobiDBLite consensus disorder prediction 40 54 - -
Tpr7g0062 695 Pfam CCCH-type zinc finger 85 109 IPR041367 -
Tpr7g0062 695 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 29 695 - -
Tpr7g0062 695 ProSiteProfiles Zinc finger C3H1-type profile. 80 111 IPR000571 GO:0046872
Tpr7g0062 695 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 29 695 - -
Tpr7g0062 695 SMART c3hfinal6 81 110 IPR000571 GO:0046872
Tpr7g0062 695 SMART c3hfinal6 121 148 IPR000571 GO:0046872
Tpr7g0062 695 Pfam Dihydrouridine synthase (Dus) 346 580 IPR035587 -
Tpr7g0062 695 ProSiteProfiles Zinc finger C3H1-type profile. 124 149 IPR000571 GO:0046872
Tpr7g0062 695 CDD DUS_like_FMN 343 578 IPR035587 -
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Tpr7g0062 Dus 1.5e-49 CL0036
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0062 K05544 - gmx:100783494 1074.31