Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0059 ATGGCTATTAGATCAAAATCAAGCAAACTTGCTCAGAACACAGTCCTTAAGCAAATACTAAGAAGATGTGCAAGCTTAGGTAAGAAGTATGATGAAGAGGATGATCAAGGTCTTCCTGTTGATGTCCCAAAAGGTCATTTTGCTGTTTATGTTGGTGAAAACAGAACCAGATACATTGTTCCAATCTCATTCTTGACACACCCTCAGTTTCAATCCCTCCTTCGACAAGCTGAAGAAGAATTTGGCTTTGATCATGATAAGGGTCTCACTATTCCTTGTCAAGAAGTTGTTTTTCGCTCTCTAACATCAATTATGCTCAGATCATGA 327 0.3853 MAIRSKSSKLAQNTVLKQILRRCASLGKKYDEEDDQGLPVDVPKGHFAVYVGENRTRYIVPISFLTHPQFQSLLRQAEEEFGFDHDKGLTIPCQEVVFRSLTSIMLRS* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0059 108 Pfam Auxin responsive protein 28 104 IPR003676 GO:0009733
Tpr7g0059 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 106 IPR003676 GO:0009733
Tpr7g0059 108 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 8 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0059 Tpr-Chr7 457700 458475 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0059 39 101 Calmodulin-binding Proteins AT3G43120 55.556 3.23e-21 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0059 K14488 - pvy:116143737 169.088