Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0053 ATGGGCTTCCGTTTACCTGCAGCTATAAGAAGGGCTTCATTTAGCAGTAGCCAAACATCATCGAAAGTCACAAATGTGCCAAAGGGATATCTTGCAGTGTACGTTGGAGAGGAAATGAAGCGGTTTGTGATCCCCATGTCATACTTGAACCAAACTTCATTTCAAGAATTGCTGAGTCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCACAGAAGATGTTTTTTTGCATACTACTTCTCACTTCAATGAGCTATAA 282 0.4113 MGFRLPAAIRRASFSSSQTSSKVTNVPKGYLAVYVGEEMKRFVIPMSYLNQTSFQELLSQAEEEFGYDHPMGGLTIPCTEDVFLHTTSHFNEL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0053 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Tpr7g0053 93 Pfam Auxin responsive protein 11 87 IPR003676 GO:0009733
Tpr7g0053 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0053 Tpr-Chr7 438165 438753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0053 15 83 Calmodulin-binding Proteins AT3G43120 50.725 1.67e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0053 K14488 - gmx:100787155 139.043