Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0052 ATGGGTATTCGTCTGCCATTTATGGTTCTTCATGCAAACAAGATATTCAAGTCATCATCACAACATCTACATAGTAGAAATCATTCCAATGTTCCAAAGGGACATGTAGCTGTCTATGTTGGAGAATCTCAGATGAAGCGTTTTGTGGTTCCAATATCTTACTTAAATCATCCTTCATTTCTTGACTTGTTAAACCGCGCTGAGGAAGAATTTGGCTACAATCATCCAATGGGTGCTCTCACTATTCCTTGCAAAGAAGAAGCATTTATTAATCTTACATCTCAACTGCGCGAGTGCATCTTGAAACATTGA 312 0.3814 MGIRLPFMVLHANKIFKSSSQHLHSRNHSNVPKGHVAVYVGESQMKRFVVPISYLNHPSFLDLLNRAEEEFGYNHPMGALTIPCKEEAFINLTSQLRECILKH* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0052 103 Pfam Auxin responsive protein 15 94 IPR003676 GO:0009733
Tpr7g0052 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 97 IPR003676 GO:0009733
Tpr7g0052 103 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0052 Tpr-Chr7 409499 412242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0052 30 103 Calmodulin-binding Proteins AT3G43120 48.649 1.31e-17 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0052 K14488 - cam:101504274 184.496