Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0050 ATGGTGCTGATTGTTCATCATGTATATCCTTTTTCTGCACTCAAGTTGATTTTGTTTATTACCACTCTCTTCACTTTATCAGATTGCTATGACCCTTTGGATCCAAATGGGAACATTTCTATAACTTTTGACATTAACAACCGTGTAGACAATGGATATCTGGCAACGGTGACTCTTGATAACTATCATCAATATCGGCACGTAGACAAACCAGGGTGGAAACTAGGATGGACATGGGCTAACAATGAGGTGATATGGTCAATGAGTGGTGCCATTGTAACTGATAGGGGTGATTGTTCATCTTACAGTGGTTCTCAGATGCCACATTCATGTAAGAAAGATCCAATAATAGTCGATATAGCTCCAGATGTCACACAAAATCGGTCAGACGGTTGTTGTCGCGGTGGCCGCCTCTCTGCTCGTGCCATTGATTATTTCAATTCATTCTCTTCATTTGAATTTGAAGTAAGAAACGTGGGGGGAAAGGAAAATTCACTTGGACAAGCACCTAATAATGTTACATTCATGGCACCTGGTCCTGGTTACACTTGTAGCCCTTTTATGCTTACTGATCCCTCAGTGTCCTTAGATTTAGGAGGACAAAGACAAGTTCCTGTTGCAAAAACTTGGAAGTCAACATGTACATACTCCAGTTTCTTAGCAAACAAGTCACCGGTATGCTGTGTTTCCCTCTCAACGTTTTACAATCCTATCATCACACCATGCCGTAATTGCACTTGTGGCGGATGCAGGGAAGCAGATAAAAATACACTCTCTTGCATAAGGCCAGGTGATCCTTTGGGAGGGTCAAATGATGAAAACAACATAATTGAATGCACCGACCATATGTGTCCGATTCGAGTCCATTGGCATATCAAGAACAATTATATGAATCAATGGAGAGTGAAGCTTACAATTTCTAACTACAACTTCAATAGAAACTACTCTAATTGGAATGTGCTGATTCAACATCCTGGTTTCAACAAAAAAGCAACAACTTACAGCTTCAATAGCACTAAACTTTCGACTCTTGGGATCCAAGATGATGGAGTTGCTCTTTTTTGGGGGATAGATTATTACAACAGTGAATTAATGCATTCTGATAAGGATAGAGTTGGTTCTGTGACAACAGAAGTACTAATGGAAAAAGATCCAAGTTCCTTCACATTGCAAAATGGATGGGCATTCCCAAGAAGAATATATTTCAACGGCGAAAACTGCGACATGCCTTTACCTGACACATTTCCTATGTTACCAAATGGCAGCTCCAGTTTAAGACCTAATTGTCTTACTTTCAATCTTTCATTAATTTGTTTATTACTTATCCTATTAGTACTCAAGTAG 1344 0.3951 MVLIVHHVYPFSALKLILFITTLFTLSDCYDPLDPNGNISITFDINNRVDNGYLATVTLDNYHQYRHVDKPGWKLGWTWANNEVIWSMSGAIVTDRGDCSSYSGSQMPHSCKKDPIIVDIAPDVTQNRSDGCCRGGRLSARAIDYFNSFSSFEFEVRNVGGKENSLGQAPNNVTFMAPGPGYTCSPFMLTDPSVSLDLGGQRQVPVAKTWKSTCTYSSFLANKSPVCCVSLSTFYNPIITPCRNCTCGGCREADKNTLSCIRPGDPLGGSNDENNIIECTDHMCPIRVHWHIKNNYMNQWRVKLTISNYNFNRNYSNWNVLIQHPGFNKKATTYSFNSTKLSTLGIQDDGVALFWGIDYYNSELMHSDKDRVGSVTTEVLMEKDPSSFTLQNGWAFPRRIYFNGENCDMPLPDTFPMLPNGSSSLRPNCLTFNLSLICLLLILLVLK* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0050 447 Pfam COBRA-like protein 53 217 IPR006918 GO:0010215|GO:0031225
Tpr7g0050 447 PANTHER PROTEIN COBRA 7 440 IPR006918 GO:0010215|GO:0031225
Tpr7g0050 447 PIRSF COBRA 1 447 IPR006918 GO:0010215|GO:0031225
Tpr7g0050 447 PANTHER COBRA-LIKE PROTEIN 7 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0050 Tpr-Chr7 391936 394537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0050 4 446 COBRA Gene Family AT3G29810 46.341 6.76e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0050 - - ccaj:109801855 676.011