LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr7g0036	ATGTCGTCAAAGCATGAAGAAGACAGCGACGACCTGGATCTCCTGCTTTCCCTTCAGGACGACCACGACGACACTGTTCTTGAAACCCCTCCACCTTCTCCCTCTCCTCTCGATGATGATGACGACCACCATGAAGTGTCGCCCAGACACAAGCAAAGGGAGAAACCAGACATGTCTGTTTTCAGAGATGCCGTTCAAGATTGCCTTCACCACCAACCCTCTAACCCTAACCCTAAATCAATTACTAAACCCCCTTTCAACGATGATATTGACAAATTCTCCGGTCTTCGCATAAGGAACCAATGTTTAACCCCTGCTGAATTTAGGGAATGTGTTCAAGACATTCGTTTTGTTCGCCTACCTGTCATCAAGAATTTGGTGAATGGGGATACTTTTTCTGGAACTTGGGTTACTGTTGGCGTGTTGACTGAGAAGGGGGTTCAGAAAACAAGTTCAAATGGGAAGAGCTACTGCATATGGAAAATTGGATGTTTGGATGAAAATATTGTTTCTCTTTTCTTGTTTGGAGATGCTTATCAGAAGAATTGCCATGAGCCCGCAGGAACCGTCTTTGCCCTCTTCAATTCTGCTGTCCGCAAGGATGCCAAGGGTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTATGAAGATGGGAACCTCTGTTGATTACGGAGTTTGCAAAGGGAAAAGAGCAGATGGGATGACTTGTACACTGGTCATAAATAAGCGTCAGGGGACTTATTGTAAATATCACAAATCAAAATCATCAGAGAAATATTCTACAGGGCGAACTGAACTCAAGGGAGGAAACTTAAGAACATCATTTAGGCCAAGAGATAATCTCAAGTCAGAAGGAATATACTTAGTTGATCCCCTCGCTGACAAAACAAACTTGAAAAAGACTAAGCCACTGAAATTGTTATCCGTGGATGGTCTCAGAAAGGCATTGAGCAATGCAGGAAAAGTGACAACTTCACACTCGCAAGGAATTAGATTTCTTTCCGAGGTTACAGGTAAAGCTGATCAAAAAATGATGAAAAATGAACCAAAGACTCGAAATGAACAAAGCAAATGCGCAGAGAAGAGGAAGTCATCTTCTGTGAATAATGGACACTCTTCTCTCATAAGAAACCAACAGTTAGATGTAAAAAGAGTAAAAACAGAGGGGCAAGGTTTGGTCGATAAAACCACAAAAAGTACGGGAAAGATGATTGAACTAGATCTTGTTAGTTCGGATGAGGACTTCTGA	1257	0.42	MSSKHEEDSDDLDLLLSLQDDHDDTVLETPPPSPSPLDDDDDHHEVSPRHKQREKPDMSVFRDAVQDCLHHQPSNPNPKSITKPPFNDDIDKFSGLRIRNQCLTPAEFRECVQDIRFVRLPVIKNLVNGDTFSGTWVTVGVLTEKGVQKTSSNGKSYCIWKIGCLDENIVSLFLFGDAYQKNCHEPAGTVFALFNSAVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMTCTLVINKRQGTYCKYHKSKSSEKYSTGRTELKGGNLRTSFRPRDNLKSEGIYLVDPLADKTNLKKTKPLKLLSVDGLRKALSNAGKVTTSHSQGIRFLSEVTGKADQKMMKNEPKTRNEQSKCAEKRKSSSVNNGHSSLIRNQQLDVKRVKTEGQGLVDKTTKSTGKMIELDLVSSDEDF*	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	344	364	-	-
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	365	383	-	-
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	342	399	-	-
	Tpr7g0036	418	Pfam	Primase zinc finger	221	266	IPR015408	GO:0005634\|GO:0006260
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	36	58	-	-
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	1	58	-	-
	Tpr7g0036	418	Gene3D	-	85	255	IPR012340	-
	Tpr7g0036	418	MobiDBLite	consensus disorder prediction	1	27	-	-
	Tpr7g0036	418	PANTHER	PROTEIN MCM10 HOMOLOG	43	375	IPR040184	GO:0003690\|GO:0003697\|GO:0006270

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr7g0036	26	417	Core DNA Replication Machinery Family	AT2G20980	54.703	4.33e-129	376

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr7g0036	K10736		-	gmx:100527758	509.605