Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0035 ATGTCTCAACAAACAACCATGCGGAAAAGGGAGATGACAGTGAAAGAGAGATGTATTTTGGTTGGAATTAGAATTGATAGACATAGCAGACATGTTCTGAATTGGGCTATAGTCAAAGTTGCTCAACCTGGTGATTCTGTTATTGCCATCCATGTTGTTACAACTCCAGATCATGTTTCTGAAAGCAAGGCCTTGGTAGATGATTATTTAGAGGTTTATGAAGGGTTATGCGATGCGAAAAAGGTTGGTCTCTCTGTTCATATCTTCACAGGAAGATCTATTCGAAAAATTCTCCTCAGAGAAGCAAAAAACAGTGCTGCCATTGCTCTAGTGGTAGGGGGTGGAGCTTCAACAGCTAAATATTGCGCAAAAGGACTACCAAGCAGCACCGATGTTATCGGTATCCAGGATGCAAGAATTGTGTTCCAAAGGTGCACCGATAATAAACAACTAATAGGTGGTGTTATAGATGATCCAAGACCAAGTCTTATTAGCAAGGTGGTCCAGTCTGCATTTGAAGACAACTTGGGGAATAAGAAATCAAAGAGCCAACAAGATAATACAGAATTGGAGGAACAATCATTTAAAGAAGAGATGAATGTGTCATCAAGATTATCAACTTCGCAGAAACTTGGATGGCCGCTTTTGCGCAGGGCGCATACAGAAATGTCGAGGGACATGTCTGTAGTGCAATGGGCAATGAACTTACCAGATCGGTCAACACACATTTCATCTCAAATTAAAGATCAGAGCTATAGAAAAATTAATAGTTTCAATAGCTGCAAGTGGTTCATCTTTGAGGTTCTTGATTCTTGCACTTGTCAATTCTCTGAAGAAAATGTGATTGGGATTGGAGGGAGCAATCGTGTGTACAGAGGAACCCTTCCCGATGGAAAGCCGGTAGCAGTCAAAGTTATGCAGTCGTCAAAACAAGCCTTCAAAGATTTTGCACTTGAAGTGGAAATAATGTCCTCATTGAACCATACATCCATTGCCCCTCTACTAGGAATTTGCATCAAGGATGAGACTTTGATATCTGTTTATGATTATTTTCCGCAAGGAACCTTAGACCAAAATCTACGCGGTAAGAACAAGGATGGATCTATGTTGTCATGGGAAGACAGATTTAAGATAGCAGTTGGGATTGGTGAAGCACTGAATTACCTGCACAATAATCAAACCTCCAAGCCAATTATACATAGAGATGTCAAGTCTTCAAACATTCTTCTTTCCCACGGGTTTGAGCCACATTTATCTGATTTTGGACTTGCCATGTGGGGACCAACAAGTTCATCTTTTGTGATACAAGATGATGTGGTAGGAACCTTTGGTTATCTTGCACCAGAATATTTCATGTATGGAAAGGTCAGTGACAAAATAGATGTCTATGCCTTTGGTGTTGTCCTACTTGAACTTATATCAGGGAGGGAACCAATTGACTCCAAAACTTGCAAAGAACATGAGAGTTTGGTCACATGGGCAAAACCAATTTTGGAGAGTGGAGATGTTAAAAGCTTATTGGATCCAAAGTTGGAAGGGAAATTTGATATAGCCCAAATGAACAAATTGGTTCTGGCAGCATCTTTATGCATTACACAGTCTGCACGCCTTCGTCCTACAATGAATCAGGTACTGAAAATCTTAAAAGGATGTGAGGAGAAAGTCGAAAACTTATTTAAGCCTCATAAGGGTGATTGTGATCATTCAGAAAATCAGGAAAATATTGATGACGAAGTCTATCCAAATTCAAGCGCAGATTTGCACTTGAGCCTTGCATTACTTGATGTTGACAATGATACTGCATCATATAGTAGTAGTAGTATAGGGAACAGCAATAATAGTGAAAGTTTGAAAGAACCATGGAGCAGATCATCTAGTTTCAATTAA 1887 0.3969 MSQQTTMRKREMTVKERCILVGIRIDRHSRHVLNWAIVKVAQPGDSVIAIHVVTTPDHVSESKALVDDYLEVYEGLCDAKKVGLSVHIFTGRSIRKILLREAKNSAAIALVVGGGASTAKYCAKGLPSSTDVIGIQDARIVFQRCTDNKQLIGGVIDDPRPSLISKVVQSAFEDNLGNKKSKSQQDNTELEEQSFKEEMNVSSRLSTSQKLGWPLLRRAHTEMSRDMSVVQWAMNLPDRSTHISSQIKDQSYRKINSFNSCKWFIFEVLDSCTCQFSEENVIGIGGSNRVYRGTLPDGKPVAVKVMQSSKQAFKDFALEVEIMSSLNHTSIAPLLGICIKDETLISVYDYFPQGTLDQNLRGKNKDGSMLSWEDRFKIAVGIGEALNYLHNNQTSKPIIHRDVKSSNILLSHGFEPHLSDFGLAMWGPTSSSFVIQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPIDSKTCKEHESLVTWAKPILESGDVKSLLDPKLEGKFDIAQMNKLVLAASLCITQSARLRPTMNQVLKILKGCEEKVENLFKPHKGDCDHSENQENIDDEVYPNSSADLHLSLALLDVDNDTASYSSSSIGNSNNSESLKEPWSRSSSFN* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0035 628 Pfam Protein kinase domain 277 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0035 628 ProSiteProfiles Protein kinase domain profile. 276 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0035 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Tpr7g0035 628 PANTHER OS01G0253100 PROTEIN 16 620 IPR045271 GO:0004714|GO:0006468
Tpr7g0035 628 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 16 620 - -
Tpr7g0035 628 CDD USP_Like 19 113 - -
Tpr7g0035 628 Gene3D HUPs 2 121 IPR014729 -
Tpr7g0035 628 Coils Coil 173 193 - -
Tpr7g0035 628 SMART serkin_6 276 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr7g0035 628 MobiDBLite consensus disorder prediction 604 628 - -
Tpr7g0035 628 SUPERFAMILY Protein kinase-like (PK-like) 256 548 IPR011009 -
Tpr7g0035 628 Gene3D Transferase(Phosphotransferase) domain 1 351 576 - -
Tpr7g0035 628 Gene3D Phosphorylase Kinase; domain 1 238 350 - -
Tpr7g0035 628 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0035 Tpr-Chr7 299562 302891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0035 259 572 Trihelix Transcription Factor Family AT5G38560 40.373 5.64e-71 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tpr7g0035 Pkinase 3.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0035 - - mtr:MTR_3g117850 996.112