Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr7g0030 ATGGCGGATCCAGAACCACTTCTTCTGGTGAATAGTAATTCGGAGGTGGAGGAGGAGGCAGCAGCAGTACCACCACCACCAATTCAATTTAACCGATCCCACCGAGTAGCATCCGTTGATGTCTTCCGTGGCCTCTCTGTTTTTCTTATGATATTGGTTGATTATGGTGGCTCCATCTTCCCAATCATTTCTCATTCCCCCTGGAATGGCCTTCACCTTGCTGATTTCGTCATGCCTTTCTTTCTCTTTCTTGTTGGAATTTCACTCTCACTTCTTTATAAGAGAAGGCCACATAGAAGAACACAAGCTACATCCAAAGCCTTTGTTAGAGCACTGCAACTCTTTATTCTTGGCATTCTTCTTCAAGGCGGTTATTTTCATGGGATAACTTCCTTCACTTATGGTGTTGACATCCAAACCATTCGATGCTTTGGCATTTTACAGAGGATTTCTATTGGATACATTCTTGCTGCTTTATGTGAGATCTGGCTTCCAACTTATTTCACATCCAAACATACCGCTTTCTTCTTCACAACTTATTACTCCCATTGGTTTGTAGCAGCAATATTGTTGGCCATTTACTCAGGATTGCTGTATGGTCTATATGTTCCAGATTGGCAGTTCAATGTATCATCCTCTACTTCTTCTCTGCCTCCAATTGCTGCCGACCATCTTTACATGGTGAATTGTTCAGTGAGAGGTGATCTTGGACCTGCCTGTAATTCTGCTGGAATGATTGATCGCTATATTCTTGGTTTTGATCATCTATATCAAAAGCCTGTTTTCAGAAATCTTAAGGAGTGCAATATGTCTAGCACTGGTCAAGTTTCAGATACTTCACCGTCATGGTGTCACGCTCCTTTTGAACCAGAAGGCATTTTAAGCTCCATAACAGCTGCAGTTTCATGTATAATTGGACTCCAATACGGTCATGTTCTTGCCCATTTAGAGGACCACAAAGGGCGCCTAAATCACTGGCTTGGTTTTTCAGTTTCATTTTTGACCCTCGGAGGGTTCCTGGCCTTAATAGGAATTCCTCTAAATAAATCTCTGTACACAATTAGTTATATGCTGCTTAGTTCTGCAGCTTCTGGTCTAACATTTATGGCTTTATATGTTCTGGTAGATGTTTACGGCCACAGGCGTTTAACAAGTGTGTTGGAGTGGATGGGGAAGCACTCTTTGAGTATATTTGTCCTTGTGTCTTCAAACTTGGCTGTGATTGCTATTCAAGGCTTTTATTGGACCAAACCCGAAAACAACATTGAAGTGAGCGAAGAAGGTCATCAACCTCATCATGGGGGGAAAGACTATGTTGACCCACCACCAGCACCCCTTCTCGACTTCGCTGAAATCAAGCTCTGGTCTTTCTACAGAGCACTCATTGCCGAGTTCATAGCAACACTCCTCTTCCTCTACGTCACTGTCGCAACCGTCATTGGTCACCAAAAACAAACTGGACCATGCGACGGTGTTGGCCTTCTAGGCATAGCATGGTCCTTCGGTGGTATGATCTTTGTCCTTGTCTACTGCACCGCCGGTATCTCCGGTGGCCACATCAACCCTGCAGTCACATTCGGCCTTTTCTTGGCTCGTAAAGTGTCTCTCATAAGAGCTGTTTTATACATGGTAGCACAGTGTTTGGGTGCTATTTCTGGTGTTGGGTTGGTCAAAGCTTTCATGAAACACCCTTACAACCACCTTGGCGGCGGTGCTAACTCCGTTGCTTCTGGTTACTCCAAGGGCTCTGCTCTCGGTGCTGAAATAATCGGTACTTTTGTGCTTGTTTACACCGTTTTCTCTGCTACTGACCCAAAGAGAAGCGCACGTGACTCACATGTCCCTGTTTTGGCTCCTTTGCCAATTGGTTTTGCTGTTTTCATGGTTCATCTCGCAACTATACCAATTACCGGTACCGGAATCAATCCTGCAAGGAGCTTTGGTGCTGCTGTTATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGACCGTTCGTGGGAGCAGCTGCGGCAGCTGCATACCATCAGTATATTCTCAGAGCGGCGGCTATCAAGGCGTTGGGGTCCTTCAGAAGCAATCCCACCAACTAG 2106 0.4506 MADPEPLLLVNSNSEVEEEAAAVPPPPIQFNRSHRVASVDVFRGLSVFLMILVDYGGSIFPIISHSPWNGLHLADFVMPFFLFLVGISLSLLYKRRPHRRTQATSKAFVRALQLFILGILLQGGYFHGITSFTYGVDIQTIRCFGILQRISIGYILAALCEIWLPTYFTSKHTAFFFTTYYSHWFVAAILLAIYSGLLYGLYVPDWQFNVSSSTSSLPPIAADHLYMVNCSVRGDLGPACNSAGMIDRYILGFDHLYQKPVFRNLKECNMSSTGQVSDTSPSWCHAPFEPEGILSSITAAVSCIIGLQYGHVLAHLEDHKGRLNHWLGFSVSFLTLGGFLALIGIPLNKSLYTISYMLLSSAASGLTFMALYVLVDVYGHRRLTSVLEWMGKHSLSIFVLVSSNLAVIAIQGFYWTKPENNIEVSEEGHQPHHGGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTVATVIGHQKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAISGVGLVKAFMKHPYNHLGGGANSVASGYSKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGAAAAAAYHQYILRAAAIKALGSFRSNPTN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr7g0030 701 CDD MIP 459 683 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 TIGRFAM MIP: MIP family channel proteins 463 679 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 ProSitePatterns MIP family signature. 519 527 IPR022357 -
Tpr7g0030 701 SUPERFAMILY Aquaporin-like 451 685 IPR023271 -
Tpr7g0030 701 Gene3D Glycerol uptake facilitator protein. 444 701 IPR023271 -
Tpr7g0030 701 PANTHER LD22376P 29 424 - -
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 459 478 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 501 525 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 538 557 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 587 605 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 623 645 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PRINTS Major intrinsic protein family signature 663 683 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr7g0030 701 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE ISOFORM X1 29 424 - -
Tpr7g0030 701 Pfam Major intrinsic protein 452 679 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr7g0030 Tpr-Chr7 261955 272186 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr7g0030 423 701 Major Intrinsic Protein MIP AT4G35100 89.247 1.87e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr7g0030 - - vra:106761912 1120.53