Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4047 ATGGAAGTTACTTCAATTACACAATTGTTGAAGAGCTTTTGTGATGCTATGCAATGGCAGTATGCTGTGTTTTGGAAGCTTAATCATCTTTCTCCGTTGACTTTGTACTGGGAAAATGGTTACCAGAAAAGTAATCAGTCTTTGGGGAGTATGTGGGGGGACATCAGTTTCGAATCCCCGGATGATGTATATTCTTCAAGGAGTGAAGGAACTGATGATTCAGGAGATTATTCAGTTCGACTTCTCATGATCGAAATGTCTCATCGAAAATACAGTTTGGAAGAAGGGGTTGTTGGCAAATTAGCTCTTGCCAAGGAACATTTTTGGGTTTCATCTGAGGATATTTTCACTGGTAAATTTGACACTAATTTAATTCCTGAGTGTCCTGATGAATGGATTCTTCAATTTGCATCAGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCACAAGGAGTGTTGCAATTTGGTTCATTTAAAACGGTTGCCGAAGACCTCAAATTTGTTACCAATATCAAGGAGCAATTCAATTTCCTTCACTGTCTGGAAGCTAATACTTCATCTTTAAACTTTGGAACTGATTCTCAAGATTGGTCATTCTCAGCTCTATCGCATTACTTGATGGATAGCTTCGACGAATCTTCGTCAGCTAGTACTTCTCTCAATATGAATAAATCAACGAGATTTCCTCAGGATGATGACTATTGGTTGTCGAGGGAAATTCAGCCAAAATCTCTTAAAAGATCACATGAAAATGAGATGGTTTCCTCATCATTTGAAACGTCAATTGATCCAAAATATATTGGTTATGTGGAGAAAAAATCAAATCATTTGGTAGAAGAGATATGGCCCTGGTCTCACTTTGTCGACAATGAAGGAAAGTTCGGTGAGATGTCAAATGGATTTAGTTCTTACTCTGAAAATAATATGACTGAGCAAGAATTTGGAGGCACTGAAACTGGTCATGTTGATGTTAAGAATTTCAATTTCAACGACTTCTCAACTGTTCCTTCAATGATTGAATTGGACAGAGCAATTGGATCTGTTGCATATAGACAGAAAGGAAAATCTATACCAAAATATATCTCAGATGAGGATACTTTCAGCAGTTCAACTTTAATATCCAATAAAAAGCAACATGATCATATTAAAAGTTTTGAGTTTCCTGAAGGAACAGATCCTGAATATCTATTAGATGCGGTTGTTGGCAATTTATACAGCGCCTCTGATGATACTTCATGTAGATCGAACAGTGTTAGGTCTCTTGTAACAATGCCGTCAGAGTTTACTGTCCCCATTCAACCAAAAATCTATTCTGAAGAAAGCAACATGTTTCTGAAAAGTTCCGATGTTGGAAGTGATCTTATGCCTCCGGTTACAGCTAAGGGTAAAGATGTATTCACGAATCATTATACATCAACTTTTGATGGAAACTCAAGCTTATTGGTTGATGAGGAACCACAGGAAAAGGTCAATAGTCATATGGAACCTATTAGTCGACCAAAGGTCTCTAGTGCGAGCAAGAAAAGAGCAAAAGTAGGTAACAACAAAAATTCAAGGCCCAGAGATAGACAGTTGATCATGGACAGGATGAAGGAGTTGAGGGAACTTATCCCAGATGGTGGGAGGTGTAGCATCGACAACCTCTTGGAACGAACCGTCAAGCACATGATGTACTTAAGAATGGTAACAAGCCAGGCTGAGAAACTGAAACGATTTGCTGATTGTGAGGTACCTGAAAGGAAAAGGCAGAAAACAAATGGCAGCCATCCTGGAAGAAGCTGTGCATTTGACTTTGAAAGTGAACAATCATGGCCCATAGTCATAGAAGATTTGGAATCCTCAGGTCACATGCTCATAGAGATGGTATGCAATGAGCATGGACTTTTCTTGGAGATTGCTCAGGCGATCCGAAGACTGGGCATTACCATCTTGAAAGGGACGTTAGAAAACCGTTCAAGTACCGGCTGGGCTTGTTTCATTGTTGAGGTTCCAAGAGGTTTTCACAGGATGGATATTTTATGTCCTTTACTGCATCTTTTGCAGCTTAGGAGAAGTCCTGTCTCATAA 2070 0.3928 MEVTSITQLLKSFCDAMQWQYAVFWKLNHLSPLTLYWENGYQKSNQSLGSMWGDISFESPDDVYSSRSEGTDDSGDYSVRLLMIEMSHRKYSLEEGVVGKLALAKEHFWVSSEDIFTGKFDTNLIPECPDEWILQFASGIKTIVLVPVLPQGVLQFGSFKTVAEDLKFVTNIKEQFNFLHCLEANTSSLNFGTDSQDWSFSALSHYLMDSFDESSSASTSLNMNKSTRFPQDDDYWLSREIQPKSLKRSHENEMVSSSFETSIDPKYIGYVEKKSNHLVEEIWPWSHFVDNEGKFGEMSNGFSSYSENNMTEQEFGGTETGHVDVKNFNFNDFSTVPSMIELDRAIGSVAYRQKGKSIPKYISDEDTFSSSTLISNKKQHDHIKSFEFPEGTDPEYLLDAVVGNLYSASDDTSCRSNSVRSLVTMPSEFTVPIQPKIYSEESNMFLKSSDVGSDLMPPVTAKGKDVFTNHYTSTFDGNSSLLVDEEPQEKVNSHMEPISRPKVSSASKKRAKVGNNKNSRPRDRQLIMDRMKELRELIPDGGRCSIDNLLERTVKHMMYLRMVTSQAEKLKRFADCEVPERKRQKTNGSHPGRSCAFDFESEQSWPIVIEDLESSGHMLIEMVCNEHGLFLEIAQAIRRLGITILKGTLENRSSTGWACFIVEVPRGFHRMDILCPLLHLLQLRRSPVS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4047 689 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 689 IPR043561 GO:0003700|GO:0006355
Tpr6g4047 689 MobiDBLite consensus disorder prediction 478 522 - -
Tpr6g4047 689 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 511 560 IPR011598 GO:0046983
Tpr6g4047 689 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
Tpr6g4047 689 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1 1 689 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4047 Tpr-Chr6 45709785 45715718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4047 394 682 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 38.413 3.45e-42 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4047 - - aprc:113862780 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g4047 6 45709785 45715718 Tpr6g4047 6 45709785 45715718 ECH