Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4027 ATGCAAACCTATCTTCAATTCTTGGCATCAGTTTTGGTGTTCCTCTTTGTTCCAGTTTTATCCCAACTTGACCAGCTCATGTATGCAGGATTCAAGGATGTTGGTCCCAACAATCTAACCTTGGATGGAACTGCAGTGATAGAGAAAAATGGAATAATAAGATTAACAAATGAAACAAACAGAATAATGAGTCACGCTTTTTACTCTTCACCTTTTCAGCTAAAGAACTCAACAACTGGTAAAGCTTTTTCCTTTTCTTCATCTTTTGCTTTTGCTGTTGTTTCTGAGTTTCCTAAATTTGGTGGTCATGGCATGGCTTTCACAATAGCACCTTCTAAGCATCTCAAAGGTTTACCTATTCAGTATCTTGGTCTTCTCAATTCAAGTAGTGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAGTTGGACACTGCCAAAGACTTAGATTTTGGTGATATCAATGATAACCATGTTGGAATAGACATCAATACTTTGAAGTCAAATGCATCTGTTACTGCTGGTTATTACACTACTGATTCAACCAAACAAGATATTAATATCAAAAGTGGAAAACCAATTCTTGTTTGGGTTGATTATGATTCTTCAGTGAATCTTGTTAGTGTTACACTTTCTCCAACTTCAATTAAACCTAAAACACCAATCTTGTCCTTACATATGGATCTATCACCTATTCTTCTTGATAATATGTATGTTGGATTCTCTGCATCGACCGGTATGCTTGCTAGCTCTCATTACTTATTGGGTTGGAGCTTTAAAATCAACGGTCCAGCCCCACGTCTTGATTTGTCTTCACTACCTCAACCTCCGCAACCAAAGAAGAAGCACATGTCTTTGATATTCATAACTGGTATTTCACTTACAGCTTCTGTTATTGTATTGTGTTTTGTTGTATTTGGTATTTACCTTTTCAGAAAAATCAAGAATGCTGATGTAATAGAAGCATGGGAGCTTCAAATTGGACCACATAGATACTCTTATCAAGAGCTCAAGAAAGCTACAAAAGGTTTCAAGGAGAAAGAGCTACTTGGACAGGGTGGTTTCGGAAGAGTTTATAAAGGGACGTTGCCGAAATCAAAGATCCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAGAGAATTTGTGTCTGAAATCTCAAGCTTAGGACGGCTTTGCCACCGGAATTTGGTTCAGTTACTCGGTTGGTGTCGCCGCAGAGGCGACCTTTTACTTGTTTACGATTTCATGGCTAATGGAAGCTTAGACAAGTACTTGTTTGATGATGCAGAAATTGTGCTAAGTTGGGAGCAAAGGTTTAAAATAATAAAGGATGTTGCTTCAGGTCTTTCATTTCTGCATGAAGGCTATGAACAAGTGGTAATACACAGAGATGTTAAGGCTAGTAATGTCTTGTTGGATTTTGAACTCAATGGAAAATTAGGTGATTTTGGTTTAGCAAGGTTGTATGAACATGGTGCTAATCCCGGCACAACGAGAGTGGTGGGAACATTAGGCTATTTGGCGCCGGAGTTGCCTAGAACAGGAAAGGCATCTACGAGCTCCGACGTTTTTGCATTTGGTGCACTTCTGCTCGAGGTTGCTTGCGGAAGAAGGCCTATTGAGCCAAAGGCCTTAGAACAAGAGTTGGTGTTGGTTGAATGGGTGTGGGAAAAGTATAAACAAGGAATGTTACTTGAAGTAGTGGATCCTAAATTAAATGGTAGTTTTGATGAATGTGAGGTTATAATGGTGTTGAAATTGGGGATGATTTGTTCAAATGATATGCCAACTATAAGGCCTAGCATGAGACAAGTAGTAATGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAATTAAGAAAGCCAGGAATTATTGATTCACAAGAGGGGTTTGATGAATTCTTGCATTCTATTGGAACTTCTTCATTTGATAAGACAAGTTCAAGCTCATATCTTGGAAATAGAGATGTGAATACTAATACTAGTTCTATCTCTTTTGCTAATTCACCTTAA 2028 0.3817 MQTYLQFLASVLVFLFVPVLSQLDQLMYAGFKDVGPNNLTLDGTAVIEKNGIIRLTNETNRIMSHAFYSSPFQLKNSTTGKAFSFSSSFAFAVVSEFPKFGGHGMAFTIAPSKHLKGLPIQYLGLLNSSSVGNFSNHLFAVELDTAKDLDFGDINDNHVGIDINTLKSNASVTAGYYTTDSTKQDINIKSGKPILVWVDYDSSVNLVSVTLSPTSIKPKTPILSLHMDLSPILLDNMYVGFSASTGMLASSHYLLGWSFKINGPAPRLDLSSLPQPPQPKKKHMSLIFITGISLTASVIVLCFVVFGIYLFRKIKNADVIEAWELQIGPHRYSYQELKKATKGFKEKELLGQGGFGRVYKGTLPKSKIQVAVKRVSHESKQGLREFVSEISSLGRLCHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDDAEIVLSWEQRFKIIKDVASGLSFLHEGYEQVVIHRDVKASNVLLDFELNGKLGDFGLARLYEHGANPGTTRVVGTLGYLAPELPRTGKASTSSDVFAFGALLLEVACGRRPIEPKALEQELVLVEWVWEKYKQGMLLEVVDPKLNGSFDECEVIMVLKLGMICSNDMPTIRPSMRQVVMILDGEVELPNELRKPGIIDSQEGFDEFLHSIGTSSFDKTSSSSYLGNRDVNTNTSSISFANSP* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4027 675 ProSiteProfiles Protein kinase domain profile. 344 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4027 675 Gene3D Transferase(Phosphotransferase) domain 1 421 630 - -
Tpr6g4027 675 CDD lectin_legume_LecRK_Arcelin_ConA 28 263 IPR001220 GO:0030246
Tpr6g4027 675 SMART serkin_6 344 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4027 675 PANTHER - 6 668 - -
Tpr6g4027 675 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 282 IPR013320 -
Tpr6g4027 675 Pfam Legume lectin domain 26 273 IPR001220 GO:0030246
Tpr6g4027 675 Pfam Protein tyrosine and serine/threonine kinase 346 612 IPR001245 GO:0004672|GO:0006468
Tpr6g4027 675 ProSitePatterns Protein kinases ATP-binding region signature. 350 373 IPR017441 GO:0005524
Tpr6g4027 675 Gene3D - 25 267 - -
Tpr6g4027 675 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 668 - -
Tpr6g4027 675 Gene3D Phosphorylase Kinase; domain 1 329 420 - -
Tpr6g4027 675 CDD STKc_IRAK 350 616 - -
Tpr6g4027 675 SUPERFAMILY Protein kinase-like (PK-like) 326 627 IPR011009 -
Tpr6g4027 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4027 Tpr-Chr6 45542444 45545096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4027 19 672 Receptor kinase-like Gene Family AT3G55550 57.186 0.0 750
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4027 Pkinase 9.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4027 - - gmx:100784346 983.786
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g4027 6 45542444 45545096 Tpr6g4027 6 45542444 45545096 ECH