Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4026 ATGACAATCCTTCTTCAATTTATGATATCAGTTTTGATATTTCTTTTCGTGCCAGTTTTATCCGAGGTTGACCAGTTCATGTATGCAGGATTCAAGGATGTTGATCTTAACAATTTAACATTGAATGGAATTGCAGAGATAGAGAAAAATGGAATAATAAGATTAACAAATGAGACAAGCAAATTAATGGGTCATGCTTTTTACTCTCAACCTTTTCAGCTGAAGAACTCAACAACCGGTACAGTTTTTTCCTTTTCTTCATCTTTTGCTATTGCTGTTGTTCCTGAATATCCTAAACTTGGTGGTCATGGAATGGCTTTCACAATAGCACCTACAAAAGATCTAAAAGCATTACCTATTCAGTATCTTGGTCTTCTTAATTCAAGTAATGTTGGTAATTTCTCTAACCATCTTTTTGCTGTTGAATTTGACACTGTTCAAGACTTTGAGTTTGGTGATATTAATGATAACCATGTTGGAATAGATATCAATAGTTTGCATTCAAATGCATCCATTATTGCTGGCTATTACACTGATGATTCAACCAAACAAGATCTTAATATCAAAAGTGGAAAACCAATTATAGTTTGGGTTGATTATGATTCTTCAATGAATCTTATTAGTGTTACACTTTCTCCAACTAGTACTAAACCCAAAAAACCAATTTTGTCCTTTCATATGGATCTATCACCTATTTTTCATGATACTATGTATGTTGGATTCTCTGCTTCAACGGGTTTACTTGCTAGCTCTCATTATTTATTGGGTTGGTGCTTTAAAATCAATGGACCTGCACCATCACTTGATTTGTTGTCACTGCCACAACTTCCACAGCCAAAAAAGAAACAAACTTCTCTGATAACTGGTGTTTCAGTTATAGCTGTGGTTATTGCATTGTGTTCTATAGCATTTGGTATTTACATTTTCAGAAAAATTAAAAATGCTGATGTAATAGAAGCATGGGAGCTTGAAATTGGACCACATAGATACTCCTATCAAGAACTCAAGAAAGCTACAAAAGGTTTTAAGGAGAAAGAGTTACTTGGGCAGGGTGGTTTCGGAAGAGTTTACAAAGGGACAATACCTAAATCAAAGATCCAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAAACAAGGGCTGAAGGAATTTGTGTCTGAAATTGCCAGCATAGGCCAGCTTCGCCACCGGAATTTGGTTCAGTTACTCGGGTGGTGTCGCCGCAGAGGCGACCTTTTACTTGTGTATGACTTCATGGCTAATGGAAGCTTAGACAAGTACTTGTTTGAAGATTCAGAAATTGTGCTAAGTTGGGAACAAAGGTTTAAGATAATAAAGGGTGTTGCTTCGGGTCTTTTGTATCTACATGAAGGGTATGAACAAGTGGTAATACATAGAGATGTTAAAGCAAGCAATGTGCTTTTAGATTTTGAGCTCAATGGAAGATTAGGTGATTTTGGTTTGGCAAGGTTGTACGAACATGGTGCTAATCCCGGCACCACAAGAGTTGTGGGAACCTTAGGCTATTTAGCGCCGGAGTTTCCTAGAACAGGAAAGGCATCTACAAGCTCTGACGTTTTTGCATTCGGTGCGCTTCTGCTGGAGGTTGCTTGCGGAAGAAGGCCTATTGAACCTAAGCTATTACACGAAGAATTGGTATTGGTGGAATGGGTGTGGGAAAAATACAAAGAAGGAAGAATGCTTGAAGTAGTGGATCCAAAATTGAATGGTAAGTTTGATGAAAATGAAGTAATGATGGTGTTGAAATTGGGGATGATATGCTCTAATGATGTGCCAACTATAAGGCCTAGCATGAGACAAGTGTTGAGGATTTTGGATGGAGAAGTTGAGTTGCCAAATGAATTGAGAAAGCCAGGAGGTATTGATTTACAAGAAGGGTTTGGTGAATTTTTGCACTCTCTTGGATCTTCTTCATTTGATAAGACGAATTCTAGTTCCTATCTTGGAAATAGAGACATTAATATTAGTTCAATCTCTTTTGCTAATTCACCTTAG 2016 0.372 MTILLQFMISVLIFLFVPVLSEVDQFMYAGFKDVDLNNLTLNGIAEIEKNGIIRLTNETSKLMGHAFYSQPFQLKNSTTGTVFSFSSSFAIAVVPEYPKLGGHGMAFTIAPTKDLKALPIQYLGLLNSSNVGNFSNHLFAVEFDTVQDFEFGDINDNHVGIDINSLHSNASIIAGYYTDDSTKQDLNIKSGKPIIVWVDYDSSMNLISVTLSPTSTKPKKPILSFHMDLSPIFHDTMYVGFSASTGLLASSHYLLGWCFKINGPAPSLDLLSLPQLPQPKKKQTSLITGVSVIAVVIALCSIAFGIYIFRKIKNADVIEAWELEIGPHRYSYQELKKATKGFKEKELLGQGGFGRVYKGTIPKSKIQVAVKRVSHESKQGLKEFVSEIASIGQLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFEDSEIVLSWEQRFKIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDFELNGRLGDFGLARLYEHGANPGTTRVVGTLGYLAPEFPRTGKASTSSDVFAFGALLLEVACGRRPIEPKLLHEELVLVEWVWEKYKEGRMLEVVDPKLNGKFDENEVMMVLKLGMICSNDVPTIRPSMRQVLRILDGEVELPNELRKPGGIDLQEGFGEFLHSLGSSSFDKTNSSSYLGNRDINISSISFANSP* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4026 671 SUPERFAMILY Protein kinase-like (PK-like) 324 615 IPR011009 -
Tpr6g4026 671 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4026 671 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Tpr6g4026 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Tpr6g4026 671 Gene3D - 24 263 - -
Tpr6g4026 671 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.4 6 666 - -
Tpr6g4026 671 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 281 IPR013320 -
Tpr6g4026 671 Pfam Legume lectin domain 25 270 IPR001220 GO:0030246
Tpr6g4026 671 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4026 671 Gene3D Transferase(Phosphotransferase) domain 1 419 625 - -
Tpr6g4026 671 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Tpr6g4026 671 CDD STKc_IRAK 348 614 - -
Tpr6g4026 671 Pfam Protein tyrosine and serine/threonine kinase 344 611 IPR001245 GO:0004672|GO:0006468
Tpr6g4026 671 CDD lectin_legume_LecRK_Arcelin_ConA 25 263 IPR001220 GO:0030246
Tpr6g4026 671 PANTHER - 6 666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4026 Tpr-Chr6 45518869 45524471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4026 19 665 Receptor kinase-like Gene Family AT3G55550 58.824 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4026 PK_Tyr_Ser-Thr 8.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4026 - - gmx:100784346 1035.79