Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4021 ATGTCTTCAAAACTTGTAGCAATAATTTTCATGTTTGTGTCATTAGTAGCAAGTGAAGATAGCAATATTAGTTTCATCTATAATGGATTCAAATCATCACATGAACATGATTTGTATCTTGATGGTGTTGCTGATTTAACCTCAAATGGTTTACTTAGATTAACCAATGATACAAAACAACAAAAGGGTCATGCTTATTATCAAAATCCTATAGTTTTCAACAATGGAAGTAGTAATGGTATTTCTTCTTTTTCAACTACTTTTGTTTTTGCTATAAGATCAGAGTTTCCTAATCTTAGTGGCCATGGAATTGTTTTTGTTATTTCTCCAACAAAAGGGTTACCAAATTCATTACCAAGTCAGTATCTTGGTGTATTCAATGAATCAAACGTTGGAAACACCGAAAACCGTGTTTTCGGGTTAGAACTTGATACAATTATGAATACAGAGTTTGATGATATCAATGATAACCATGTCGGAATTGATCTCAATGGATTGAAATCAGAAAAATCAGCTTCTGCAGGATATTATGACATTGATCATAATGAGTTCAAGAATTTAAGCCTTTTTACTGGCTTACCAATGCAAGTTTGGTTGGAATATGATAGTGAAAAGACAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAAAACAACCTTTGTTATCATTGAACAAAGATCTTTCATCAATTTTGAAAAATACTATGTATGTTGGATTCTCATCTTCAACAGGTTCAATTCTAACCTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCACAAAACCTTAAAATCTCAGAACTTCCAAAGCTACCAACTTTAGGTGAAAAAAAAGATTCTAAGGTAATTTTGACTATTGGGTTGCCTTTGATTTCACTATGTTTGATTCTAATGGTAGCTATAGGAATCTTTCATTTCATCAAAAGGAAGAAAAAGTTTTCTGAACTTCATGAAGATTGGGAAAAAGACTATGGAACACAAAGATTCAAGTACAAAGATTTATACTTTGCAACAAATGGTTTCAAAGAGAAGGAGCTATTAGGAACAGGTGGATTTGGTAGAGTCTACAAAGGTGTAATGCCAAATTCAAAACTTGAAGTAGCTGTTAAGAGAGTTTCACATGAATCAAGACAAGGAATGAAGGAATTCGTCGCGGAAATTGTTAGTATCGGTCGTCTTCGTCATAGAAACCTTGTTCCGCTTCTCGGCTATTGCAGGCGGAAAAACGAGTTACTTTTGGTTTATGATTATATGGCTAATGGAAGTTTAGACAAATATTTACACAAACACAACAAAGGACAAAGATTGTTTACCTTAAATTGGAGTCAAAGGTTTAGAATCATTAAAGGTGTTGCTTCTGGTTTGTTTTATTTACATGAAGAATGGGAACAAGTAGTAGTTCATAGAGATATTAAAGCTAGTAATGTTTTATTAGATTCTGAATTAAATGGTAGATTAGGTGATTTTGGTCTTTCAAGATTATATGATCATGGAACAGATCCTCAAACAACTCATGTTGTTGGAACACTTGGTTATTTAGCACCAGAACATACAAGAACAGGTAAAGCTACAACAAGTTCTGATGTTTATTCTTTTGGTGCTTTTTTACTTGAAGTTGTTTGTGGTAAAAGACCTATAGAACAAATAAGAGAATGTGAGAGTGTAATATTAGTTGACTATGTTTATGATTGTTGGAAAAGAGGTGACATTGTTGAGGCTAAAGATGTAAATTTAGGTGTGGATTATATTGTTGAAGAAGTTGAATTGGTTTTGAAACTTGGTTTGTTATGTTCACATTGTGAAGCTTTGGCTAGACCAAGTATGAGACAAGTTTTGAGGTATTTGGAAAGGGATTTGGCACTTCCTGATTTGAGTTTTCTTAGTTTAAGTTCAATGGGATTAACTTCTGGACAGTGTGAGAATTTTCAAGATTTTGGTATGTCTTATGCTTCTTCTTCTATGGATAGACCATTTTCACATACTTCTTCAATTGCTGAATCACTTCTTTCTGGTGGTAGATGA 2043 0.3294 MSSKLVAIIFMFVSLVASEDSNISFIYNGFKSSHEHDLYLDGVADLTSNGLLRLTNDTKQQKGHAYYQNPIVFNNGSSNGISSFSTTFVFAIRSEFPNLSGHGIVFVISPTKGLPNSLPSQYLGVFNESNVGNTENRVFGLELDTIMNTEFDDINDNHVGIDLNGLKSEKSASAGYYDIDHNEFKNLSLFTGLPMQVWLEYDSEKTKIDVTLAPINVVKPKQPLLSLNKDLSSILKNTMYVGFSSSTGSILTSHYVLGWSFKVNGQAQNLKISELPKLPTLGEKKDSKVILTIGLPLISLCLILMVAIGIFHFIKRKKKFSELHEDWEKDYGTQRFKYKDLYFATNGFKEKELLGTGGFGRVYKGVMPNSKLEVAVKRVSHESRQGMKEFVAEIVSIGRLRHRNLVPLLGYCRRKNELLLVYDYMANGSLDKYLHKHNKGQRLFTLNWSQRFRIIKGVASGLFYLHEEWEQVVVHRDIKASNVLLDSELNGRLGDFGLSRLYDHGTDPQTTHVVGTLGYLAPEHTRTGKATTSSDVYSFGAFLLEVVCGKRPIEQIRECESVILVDYVYDCWKRGDIVEAKDVNLGVDYIVEEVELVLKLGLLCSHCEALARPSMRQVLRYLERDLALPDLSFLSLSSMGLTSGQCENFQDFGMSYASSSMDRPFSHTSSIAESLLSGGR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4021 680 Pfam Legume lectin domain 23 276 IPR001220 GO:0030246
Tpr6g4021 680 Gene3D Transferase(Phosphotransferase) domain 1 425 633 - -
Tpr6g4021 680 ProSiteProfiles Protein kinase domain profile. 348 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4021 680 Pfam Protein kinase domain 348 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4021 680 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524
Tpr6g4021 680 CDD STKc_IRAK 354 624 - -
Tpr6g4021 680 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 283 IPR013320 -
Tpr6g4021 680 Gene3D - 19 268 - -
Tpr6g4021 680 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 5 675 - -
Tpr6g4021 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Tpr6g4021 680 SUPERFAMILY Protein kinase-like (PK-like) 330 633 IPR011009 -
Tpr6g4021 680 CDD lectin_legume_LecRK_Arcelin_ConA 23 265 IPR001220 GO:0030246
Tpr6g4021 680 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Tpr6g4021 680 SMART serkin_6 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4021 680 PANTHER - 5 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4021 Tpr-Chr6 45449709 45452063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4021 18 680 Receptor kinase-like Gene Family AT2G37710 61.504 0.0 812
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4021 Pkinase 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4021 - - gmx:100802293 982.245