Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4019 ATGTTTCTCAAGCTGGTGTTTATGTTGTTTTTACTTGTTACGTTGGTAGCAAGTAAAGACAACAGTTTCACCTATAATGGTTTCCAATCATCAGATCTAGATCTTGATGGTACTGCTGATGTAATAGAAGATGGCTTACTAAGACTAACCAATGATAACACGCGAGTAACAGGCCATGCTTTCTATCCAAATCCTATAGTTTTCAAAAAAACTTCTGATGGAAGGGTGTCTTCTTTCTCAACTACTTTTGTATTTGCCATAAGACCTATATATCCAACTCTTGGTGGCCATGGAATTGTTTTTGTTGTTTCTCCCACAAAAGGGCTACCAAATTCACTACCAAGTCAGTACCTTGGTCTATTCGATTCGTCAAACAATGGAAACAGTAACAACCATGTTTTTGGTGTTGAACTTGATACTATTCAAAATGTTGAGTTTGATGATATCAATGATAACCATATTGGTATTGATATCAATGATTTGAAATCAGATATCTCAACTCCTGCAGGATATTATGATGGTCAACTCAAGAATTTGATCCTTTTGAGTGGCAATCCTATGCAGATATGGATTGAATATGATAGTGAAAAAACAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAACACGACCTTTGTTATCAACGACCAAAGATCTTTCTCCAATTCTTAACAATACTATGTATGTTGGGTTTTCATCAGCTACCGGTCTTGTTAGTTGTAATCATGATGTTCTTGGTTGGAGTTTTAAGGTTGATGGTCAAGTTCAAAACCTTATAATCTCTAAACTTCCAACACTAGCAAGATTTTCTGAGAAAAAAGAGTCAAAAGTTTTAACTGTTGGGTTGCCATTGATTTTGCTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATGTATTATATCAAAAGGAAGAAGTTTACTGAGATTCTCGAAGATTGGGAACATGAATATGGACCACATAGATTTAAGTTCAAAGATCTATACTTTGCTACAAAGGGTTTCAAGGAAAAAGGGCTATTGGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATCCCAAGTTCCAAACTTGAGGTTGCTGTGAAAAGGGTGTCTCATGAATCAAAACAAGGGATGAGGGAATTTGTGTCGGAAATTGTTAGCATCGGTCGTCTTCGTCACAGGAATCTTGTTCCTCTTCTCGGCTATTGCAGGCGAAAAGACGAGTTACTTTTGGTTTATGAGTACATGCCTAATGGAAGTTTAGATAATTATCTTCACAAACAACCAAAAGTGACCTTGAATTGGTGTCAAAGATTTAGAATCATCAAAGGTGTTGCTTCAGGTTTGTTTTATCTACATGAAGAATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCTAGCAATGTGATGTTAGATTCTGAATTTAATGCTAGATTGGGAGATTTTGGACTTTCAAGATTATATGATCATGGTGCTGATCCAGATACAACTCATGTAGCTGGAACTGTAGGTTATCTTGCTCCTGAGCATACTAGAACAGGTAAAGCTACTAAATTTTCTGATGTGTATGCTTTTGGTGCATTTCTTCTTGAGGTTGTTTGTGGTAGGAGGCCTATAGATCGTGTAGGAAAATATGAGAGTGTTATTCTAGTTGATTTTGTGTTTGAATGTTGGAAAAGAGGAGAGATTCTTGAGGCAAAGGATGTAAACTTAGGATCAGATTATGTGTCTGATGAGGTTAAATTGGTGTTGAAACTTGGCTTGTTGTGTTCACATTCAGAACCTTTGGCTAGACCAAGTATGAGGCAAGTTATGCAGTATTTGGAGAGGGATATACCTTTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTTTGGATTAACATTTGGGTACCAAGAGCAAGAAGTTGTCAAGGATAAGACAATGTCACATATTTCTGTGTCTGTTACTGAATCACTTCTCTCTGGTGGTCGTTGA 1977 0.3657 MFLKLVFMLFLLVTLVASKDNSFTYNGFQSSDLDLDGTADVIEDGLLRLTNDNTRVTGHAFYPNPIVFKKTSDGRVSSFSTTFVFAIRPIYPTLGGHGIVFVVSPTKGLPNSLPSQYLGLFDSSNNGNSNNHVFGVELDTIQNVEFDDINDNHIGIDINDLKSDISTPAGYYDGQLKNLILLSGNPMQIWIEYDSEKTKIDVTLAPINVVKPTRPLLSTTKDLSPILNNTMYVGFSSATGLVSCNHDVLGWSFKVDGQVQNLIISKLPTLARFSEKKESKVLTVGLPLILLSLVFMITLGVMYYIKRKKFTEILEDWEHEYGPHRFKFKDLYFATKGFKEKGLLGVGGFGRVYKGVIPSSKLEVAVKRVSHESKQGMREFVSEIVSIGRLRHRNLVPLLGYCRRKDELLLVYEYMPNGSLDNYLHKQPKVTLNWCQRFRIIKGVASGLFYLHEEWEQVVIHRDIKASNVMLDSEFNARLGDFGLSRLYDHGADPDTTHVAGTVGYLAPEHTRTGKATKFSDVYAFGAFLLEVVCGRRPIDRVGKYESVILVDFVFECWKRGEILEAKDVNLGSDYVSDEVKLVLKLGLLCSHSEPLARPSMRQVMQYLERDIPLPDLSLLSLSSFGLTFGYQEQEVVKDKTMSHISVSVTESLLSGGR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4019 658 ProSiteProfiles Protein kinase domain profile. 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4019 658 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 4 635 - -
Tpr6g4019 658 CDD lectin_legume_LecRK_Arcelin_ConA 22 257 IPR001220 GO:0030246
Tpr6g4019 658 Gene3D Transferase(Phosphotransferase) domain 1 415 619 - -
Tpr6g4019 658 Gene3D Phosphorylase Kinase; domain 1 323 414 - -
Tpr6g4019 658 Pfam Protein kinase domain 338 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4019 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Tpr6g4019 658 SMART serkin_6 338 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4019 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 258 IPR013320 -
Tpr6g4019 658 PANTHER - 4 635 - -
Tpr6g4019 658 Pfam Legume lectin domain 21 267 IPR001220 GO:0030246
Tpr6g4019 658 Gene3D - 19 268 - -
Tpr6g4019 658 CDD STKc_IRAK 344 610 - -
Tpr6g4019 658 SUPERFAMILY Protein kinase-like (PK-like) 312 609 IPR011009 -
Tpr6g4019 658 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4019 Tpr-Chr6 45425377 45429536 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4019 17 658 Receptor kinase-like Gene Family AT2G37710 61.035 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4019 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4019 - - gmx:100783815 914.064