Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4017 ATGTTCCTTAATCTTGTGTTGGTGTTTTTTCTTGTTACATTGGTAGCAAGTAAAGATAATAGTTTCATCTATAACAATGGATTCCAATCATCTCATTTGTATCTTGATGGTATAGCTAATTTAACCTCCAATGGCATAATAAGACTCACCAATGACACCAAACAACAAAAAGCACATGCTTTTTATCCAAATCCTATAGTTTTCAAAAACACTTTCAATGGAAGTGTCTCTTCTTTTGCAACTACTTTTGTATTTGCTATAAGACCTGAATATCCAACTCTTAGTGGCCATGGAATTGTTTTTGTTGTTTCTCCTACAAAAGGGCTACCATATTCAATACCAAGTCAATACCTTGGTTTATTCAACCAATCAAACAATGGAAACACAAATAACCATGTTTTTGGTGTTGAACTTGATACTATTCAAAGTAAAGAGTTTAATGATATCAATGATAACCATGTTGGTATTGATATCAATGATTTGAAATCAGATAACTCAACTCCTGCAGGATATTATGATGATAATAATGGTCAATTCAAGAATTTGAGCCTTTACAGTGGCAATCCTATGCAGGTATGGATTGAATATGATAGTGAAAAGACAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAAAAAAATCTTTGTTATCATTGACTCAAGATCTTTCTCCAATTATGAACAATAGTATGTATGTTGGATTTTCATCAGCAACTGGTTCAGTTTTCACTTCTCATTATGTTCTTGGTTGGAGTTTTAAGGTTAATGGTCAAGCTCAAGAGCTTGTAATCTCTCAACTTCCAAAGTTACCAAGATTTGGTGAGAAAAAAGAGTCAAAATTTTTAACTGTTGGATTACCTTTGATTTTGTTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATTTATTTTATCAAAAGAAAGAATAAGTTTGCTGAGATTCTTGAAGATTGGGAACATGAATATGGCCCACATAGATTTAAGTTCAAAGATCTATACTTTTCTACAAAGGGTTTCAAGGAAAAAGGACTATTAGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATGCCAGGTTCAAAACTTGAGGTAGCTGTGAAGAGAGTTTCTCATGAATCAAGACAAGGGATGAGGGAATTCGTGTCGGAGATTGTTAGTATCGGTCGTCTTCGTCATAGGAATCTTGTTCCACTTCTTGGCTATTGCAGGCGAAAAGGTGAGTTACTTTTGGTTTATGATTACATGCCTAATGGAAGTTTAGACAATTTTCTATATAACCAACCGAAAGTGAGCTTGAATTGGCATCAAAGATTTAAAATCATCAAAGGTGTTGCTTCGGGTTTGTTTTATCTTCATGAAGGGTGGGAACAAGTTGTGATTCATAGAGATATAAAGGCTAGTAATGTTTTATTAGATGCTGAAATGAATGGTAGATTAGGAGATTTTGGTCTAGCAAGATTGTATGATCATGGTGCTGATCCACACACAACTCATTTGGTTGGAACTGTAGGGTATCTAGCTCCTGAGCATACAAGAACAGGTAAAGCCACTAAATATACTGATGTGTTTGCTTTTGGTGCTTTTCTTCTCGAGGTTGTTTGTGGTAAGAGACCTATAGATCATGTTGCCGAAAATGAGACTGTAATTCTAGTTGATTTTGTGTTTGAATGTTGGAAAAGAGGTGAGATTCTTGAGGCAAAAGATATAAACTTAGGATCAGATTATGAATCTGAAGAAGTTGAATTGGTGTTGAAACTTGGTTTGTTATGTTCACATTCAGAACCTATGCCTAGACCAAGTATGAGACAAGTTGTGCAGTATTTGGAGAGGGATATACCTTTACCAGATTTGTCTTTGCTTAGTTTATCTTCTTCTGGTTTAACTTTTGGGTACCAAGAATTTTTTGAGGACTTTCCTATGTCATATCCATCTTCTATGGATAAGACAATGTCGCATACTTCTGTATCTATTGCTGATTCACTTCTCTCCGGTGGTCGTTGA 2013 0.3482 MFLNLVLVFFLVTLVASKDNSFIYNNGFQSSHLYLDGIANLTSNGIIRLTNDTKQQKAHAFYPNPIVFKNTFNGSVSSFATTFVFAIRPEYPTLSGHGIVFVVSPTKGLPYSIPSQYLGLFNQSNNGNTNNHVFGVELDTIQSKEFNDINDNHVGIDINDLKSDNSTPAGYYDDNNGQFKNLSLYSGNPMQVWIEYDSEKTKIDVTLAPINVVKPKKSLLSLTQDLSPIMNNSMYVGFSSATGSVFTSHYVLGWSFKVNGQAQELVISQLPKLPRFGEKKESKFLTVGLPLILLSLVFMITLGVIYFIKRKNKFAEILEDWEHEYGPHRFKFKDLYFSTKGFKEKGLLGVGGFGRVYKGVMPGSKLEVAVKRVSHESRQGMREFVSEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDNFLYNQPKVSLNWHQRFKIIKGVASGLFYLHEGWEQVVIHRDIKASNVLLDAEMNGRLGDFGLARLYDHGADPHTTHLVGTVGYLAPEHTRTGKATKYTDVFAFGAFLLEVVCGKRPIDHVAENETVILVDFVFECWKRGEILEAKDINLGSDYESEEVELVLKLGLLCSHSEPMPRPSMRQVVQYLERDIPLPDLSLLSLSSSGLTFGYQEFFEDFPMSYPSSMDKTMSHTSVSIADSLLSGGR* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4017 670 SMART serkin_6 342 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4017 670 Gene3D Transferase(Phosphotransferase) domain 1 419 617 - -
Tpr6g4017 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Tpr6g4017 670 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 5 655 - -
Tpr6g4017 670 Gene3D - 19 270 - -
Tpr6g4017 670 CDD lectin_legume_LecRK_Arcelin_ConA 21 260 IPR001220 GO:0030246
Tpr6g4017 670 Gene3D Phosphorylase Kinase; domain 1 327 418 - -
Tpr6g4017 670 PANTHER - 5 655 - -
Tpr6g4017 670 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 278 IPR013320 -
Tpr6g4017 670 Pfam Protein kinase domain 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4017 670 Pfam Legume lectin domain 20 270 IPR001220 GO:0030246
Tpr6g4017 670 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Tpr6g4017 670 SUPERFAMILY Protein kinase-like (PK-like) 323 625 IPR011009 -
Tpr6g4017 670 CDD STKc_IRAK 348 614 - -
Tpr6g4017 670 ProSiteProfiles Protein kinase domain profile. 342 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4017 Tpr-Chr6 45405617 45407970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4017 16 670 Receptor kinase-like Gene Family AT2G37710 65.753 0.0 874
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4017 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4017 - - adu:107484540 999.579