Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4016 ATGAAATATGCAAATTTTGTTTTTCACTTCAAACAAAATATAGTCATGTTTCTCAAGCTGGTGTTTATGTTGTTTTTTCTTGTTACGTTGGTAGCAAGTAAAGACAACAGTTTCACCTATAATGGTTTCCAATCATCAGATCTAGATCTTGATGGTACTGCTGATGTAATAGAAGATGGCTTACTAAGACTAACCAATGATAACACGCAAGTAACAGGCCATGCTTTCTATCCAAATCCTATAGTTTTCAAAAAAACTTCTGATGGAAGTGTGTCTTCTTTCTCAACTACTTTTGTATTTGCCATAAGATCTCAATATCCAAAACTTAATGGCCATGGAATTGTTTTTGTTGTTTCTCCCACAAATGGGTTTCCAAATTCACTACCAAGTCAGTACCTTGGTCTATTCAATTCGTCAAACATTGGAAACAGTAGCAACCATGTTTTTGGTGTTGAACTTGATACTCTTCAAGAGTTTGAGTTTGATGATATCAATAATAACCATGTTGGTATTGATATCAATGATTTGAAATCATATAACGCAACTCCTGCAGGATATTATGATGATGAGAATAATGGTCAACTCAAGAATTTGACCCTTTTTAGTGGCAATCCTATGCAGGTATGGATTGAATATGATAGTGAAAAGACAAAGATTGATGTTACTTTAGCTCCAATTAATGTTGTTAAACCAACACGACCTTTGTTATCAACGACCAAAGATCTTTCTCCAATTTTTAACAATACTATGTATGTTGGGTTTTCATCAACTACCGGTCTTATTAGTAGTTATCATGATGTTCTTGGTTGGAGTTTTAAGGTTGATGGTCAAGTTAAAAACCTTATAATCTCTAAACTTCCAACACTAGCAAGATTTTCTGAGAAAAAAGAGTCAAAAATTTTAACTGTTGGGTTGCCATTGATTTTGCTAAGTTTGGTTTTCATGATAACTTTAGGGGTTATGTATTATATCAAAAGGAAGAAGTTTACTGAGATTCTCGAAGATTGGGAACATGAATATGGACCACATAGATTTAAGTTCAAAGATCTATACTTTGCTACAAAGGGTTTCAAGGAAAAAGGGCTATTGGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATACCAAGTTCCAAACTTGAGGTTGCTGTGAAAAGGGTGTCTCATGAATCAAAACAAGGGATGAGGGAATTTGTGTCGGAAATTGTTAGTATCGGTCGTCTTCGTCACCGGAATCTTGTTCCGCTTCTCGGCTATTGCAGGCGAAAAGATGAGTTACTTCTGGTTTATGAGTACATGCCTAATGGAAGTTTAGATAATTATCTTCACAAACAACCAAAAGTGACCTTGAATTGGTCTCAAAGATTTAGAATCATCAAAGGTGTTGCTTCAGGTTTGTTTTATCTGCATGAAGAATGGGAGCAAGTTGTGATTCATAGAGACATAAAAGCTAGCAATGTGATGTTAGATTCGGAATTTAATGCTAGATTGGGAGATTTTGGACTTTCAAGATTATATGATCATGGTGCTGATCCAGATACAACTCATGTAGCTGGAACTGTAGGTTATCTTGCTCCTGAGCATACTAGAACAGGTAAAGCTACTAAATTTTCTGATGTGTATGCTTTTGGTGCATTTCTTCTTGAGGTTGTTTGTGGTAGGAGGCCTATAGATCGTGTAGGAAAATATGAGAGTGTTATTCTAGTTGATTTAGTGTTTGAATGTTGGAAAAGAGGTGAGATTCTTGAGGCAAAGGATGTAAACTTAGGATCAGATTATGTGTCTGATGAGGTTGAATTGGTGTTGAAACTTGGCTTGTTGTGTTCACATTCAGAACCTTTGGCTAGACCAAGTATGAGGCAAGTTATGCAGTATTTGGAGAGGGATATACCTTTGCCTGATTTGTCTTTGCTTAGTTTATCTTCTTTTGGATTAACATTTGGGTTTGGGTACCATGAGCAAGAAGTTGTCAAGGACAAGACAATGTCACATATTTCTGTGTCTGTTACTGAATCACTTCTCTCTGGTGGTCGTTGA 2040 0.3608 MKYANFVFHFKQNIVMFLKLVFMLFFLVTLVASKDNSFTYNGFQSSDLDLDGTADVIEDGLLRLTNDNTQVTGHAFYPNPIVFKKTSDGSVSSFSTTFVFAIRSQYPKLNGHGIVFVVSPTNGFPNSLPSQYLGLFNSSNIGNSSNHVFGVELDTLQEFEFDDINNNHVGIDINDLKSYNATPAGYYDDENNGQLKNLTLFSGNPMQVWIEYDSEKTKIDVTLAPINVVKPTRPLLSTTKDLSPIFNNTMYVGFSSTTGLISSYHDVLGWSFKVDGQVKNLIISKLPTLARFSEKKESKILTVGLPLILLSLVFMITLGVMYYIKRKKFTEILEDWEHEYGPHRFKFKDLYFATKGFKEKGLLGVGGFGRVYKGVIPSSKLEVAVKRVSHESKQGMREFVSEIVSIGRLRHRNLVPLLGYCRRKDELLLVYEYMPNGSLDNYLHKQPKVTLNWSQRFRIIKGVASGLFYLHEEWEQVVIHRDIKASNVMLDSEFNARLGDFGLSRLYDHGADPDTTHVAGTVGYLAPEHTRTGKATKFSDVYAFGAFLLEVVCGRRPIDRVGKYESVILVDLVFECWKRGEILEAKDVNLGSDYVSDEVELVLKLGLLCSHSEPLARPSMRQVMQYLERDIPLPDLSLLSLSSFGLTFGFGYHEQEVVKDKTMSHISVSVTESLLSGGR* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4016 679 PANTHER - 17 672 - -
Tpr6g4016 679 SUPERFAMILY Protein kinase-like (PK-like) 331 628 IPR011009 -
Tpr6g4016 679 Gene3D Transferase(Phosphotransferase) domain 1 434 638 - -
Tpr6g4016 679 Gene3D - 34 288 - -
Tpr6g4016 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 36 292 IPR013320 -
Tpr6g4016 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Tpr6g4016 679 CDD lectin_legume_LecRK_Arcelin_ConA 37 276 IPR001220 GO:0030246
Tpr6g4016 679 CDD STKc_IRAK 363 629 - -
Tpr6g4016 679 SMART serkin_6 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4016 679 ProSiteProfiles Protein kinase domain profile. 357 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4016 679 Pfam Legume lectin domain 36 285 IPR001220 GO:0030246
Tpr6g4016 679 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g4016 679 Gene3D Phosphorylase Kinase; domain 1 342 433 - -
Tpr6g4016 679 ProSitePatterns Protein kinases ATP-binding region signature. 363 386 IPR017441 GO:0005524
Tpr6g4016 679 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 17 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4016 Tpr-Chr6 45358440 45382208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4016 32 679 Receptor kinase-like Gene Family AT2G37710 61.212 0.0 792
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr6g4016 Pkinase 2.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4016 - - gmx:100783815 908.286