Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g4010 ATGAAGCTTGATGACGATCTTGGTCCTGACCGTGAAGATCATTTTCAAACGGATGATGAAGAAAATCAAGCAGATAGAGATTTTGAAAATGATGATGATGACGACGACGACGATACCGATTCAGATAAAAATTCTCCTCATTCTAATGAGGTTCATTTTAATACCACATGGCCTCAAACCTATAGGACATCAATGGACATGTTAACAAGTGTAAGTTTGAGTTTGACACCAACTGGAATTAGTTTCCTAAAGAAAATTGGTACAACAGGAAAGAATAGTTTTATCTCTAAGGAAAATCAAGATGATTCCAATTCTTGGACAATACCTCTTATTGCTGAAGAGGAAACTCCAATCAAACAAGAGCAGTCAACTTCAACATCTCCTGTTATTTCTGACATCAAACTTGTCAGCACTCCAAAAATCTCTGCCATTGAAATTCCACCACAACAGAGACAATGTTCCTTTGTTCAATCAGTAATTAATGGGACGAATATATTATGTGGGATAGGACTTATGACCATTCCATATGCAGTAAAAGAAGGAGGGTTGTTGAGTCTTTCATTACTGTTAATGTTTGCTCTTATTTGTTGTTATACTGGGATTTTATTGAAGAGATGTTTGGAATGCTACCCTGGAATCAGCAGTTATCCAGATATTGGCCACGCTGCTTTTGGAATCGTTGGTCGCTTGGGGATTGCGATCATTTTATACATGGAACTATTTGCTTCTTCTGTGGAGTTTTTAATACTAGTAAGTGATAACCTCTCATCACTTTTCCCCAACACCAGTATGACTTTAGCCGGTATAGAACTTGGTTCACATCAAGTTTTTGCCATCACTGCAGCTGTTCTTGTTTTACCAACAGTTTGGTTGAAAAATCTAAGCCTACTTTCATATATTTCAGTTGGAGGAATATTTGCAACAATACTTGTATCACTTTGCTTGTTTTGGGTTGGTGCAATAGACCAAGTTGGATATATTAATCAAGAATATAAATTCCTAGACATCGAAAACATATCCGTATCAATTGGTCTCTTTGGTTTTGGATTTGCTGGCCATGCTGTTTTTCCAAATATCTATTCATCTATGAAGGAACCATCCAAATTCCCATTAGTTCTATATATCAGTTTTGCTTTCTGTCTTGTAATGTACCTCAGTGTAGGAATAGTTGGCTATATAATGTTTGGCGAAAATATTAAATCTCAGTTTACTTTAAACATGCCGAAAGAATTATATGCATCCAAGATAGCAATTTGGACAACTGTTGTGACTCCTCTTGCAAAGTATGCTTTAACATTATTGCCTATTGCATCAAGCATTGAGGAACTTGTCCCTTCTAGGCTAAGATGTTATGCTATGTCTATTGTTATCAGAACAATTTTGGTGATTTCATGTTTAGTTGTGGCTCTCTCTTTTCCATATTTTGGTTCTGTGATGGCACTAATTGGTTCTATGATGTCAATGCTAGTTGCTCTTATTTATCCTTGTGCATGTTATCTCAAGCTACAGAGTGGCAGATTATCAAATATGCAGATAATAAATTGCATTTTGGTTATTATTGTGGGGGTGATATGCGCTATGATAGGAACATACTCAGCTACTACAAGAATATCTAGTGGTGGAGACTAA 1629 0.3622 MKLDDDLGPDREDHFQTDDEENQADRDFENDDDDDDDDTDSDKNSPHSNEVHFNTTWPQTYRTSMDMLTSVSLSLTPTGISFLKKIGTTGKNSFISKENQDDSNSWTIPLIAEEETPIKQEQSTSTSPVISDIKLVSTPKISAIEIPPQQRQCSFVQSVINGTNILCGIGLMTIPYAVKEGGLLSLSLLLMFALICCYTGILLKRCLECYPGISSYPDIGHAAFGIVGRLGIAIILYMELFASSVEFLILVSDNLSSLFPNTSMTLAGIELGSHQVFAITAAVLVLPTVWLKNLSLLSYISVGGIFATILVSLCLFWVGAIDQVGYINQEYKFLDIENISVSIGLFGFGFAGHAVFPNIYSSMKEPSKFPLVLYISFAFCLVMYLSVGIVGYIMFGENIKSQFTLNMPKELYASKIAIWTTVVTPLAKYALTLLPIASSIEELVPSRLRCYAMSIVIRTILVISCLVVALSFPYFGSVMALIGSMMSMLVALIYPCACYLKLQSGRLSNMQIINCILVIIVGVICAMIGTYSATTRISSGGD* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g4010 542 MobiDBLite consensus disorder prediction 1 56 - -
Tpr6g4010 542 MobiDBLite consensus disorder prediction 22 40 - -
Tpr6g4010 542 PANTHER OS05G0424000 PROTEIN-RELATED 39 537 - -
Tpr6g4010 542 PANTHER AMINO ACID TRANSPORTER AVT1D 39 537 - -
Tpr6g4010 542 Pfam Transmembrane amino acid transporter protein 152 532 IPR013057 -
Tpr6g4010 542 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g4010 Tpr-Chr6 45301574 45306718 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g4010 1 539 Amino Acid or Auxin Permease AAAP Family AT5G02180 49.911 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g4010 K15015 - qsu:112025453 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g4010 6 45301574 45306718 Tpr6g4010 6 45301574 45306718 ECH