Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g4005 | ATGATTGAGTACTCATCTATGTCAAAGACAATGATGGAGAAAATAATGACTTCTAATTGGTCAGAAGGGTCAGAACTTTTAAGAGACCTTTTAGTTGATGAGTCTAATTCTCTTCTTATGTTGCCACAAGGGATAGTAAATGAAGTAACCAACACAAGTCATGATGATTTTTCAAAAGACCAAGACTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATTTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCACTTTCAACAAATTTCATCAACAAGAGTTTCAATATTGGAAAGTAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGCTTTGGCAATGGGATGAGTGATGATGGATATAGGTGGAGGAAGTATGGTCAAAAATCCATTAAAAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCTAGGTGTGGTGCTAAGAAGCAAGTTGAGAGATCCATTGAAGACCCTGACACTCTTATAATCACTTATGAAGGACTCCACTTACATTTTACTTATCCATATTTCTTAGTGGGCCAATCACATCAATCTACTGCTCATCCACCAATCAAGAAGTCCAAGCCCACTTCTTCACAAGAAGCCCATGAAGCCCAAACTAGTGCTTCTTTGGGACTCATATCACCAAATTTATTGGACTCTACACAAGATAAGGCCCAAGAAAATTTGGGCCGGCAAGGATTGCTCGAAGACATGGTACCATTCATGGTTAGGAACCCCACAAACAATGTTGATAGTGATTGA | 801 | 0.3708 | MIEYSSMSKTMMEKIMTSNWSEGSELLRDLLVDESNSLLMLPQGIVNEVTNTSHDDFSKDQDFNRFISNIYSGPTISDIENALLVTNHSNHFQQISSTRVSILESSLSKIENKYTLKIKCFGNGMSDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSIEDPDTLIITYEGLHLHFTYPYFLVGQSHQSTAHPPIKKSKPTSSQEAHEAQTSASLGLISPNLLDSTQDKAQENLGRQGLLEDMVPFMVRNPTNNVDSD* | 267 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g4005 | 266 | MobiDBLite | consensus disorder prediction | 197 | 239 | - | - | |
Tpr6g4005 | 266 | PANTHER | WRKY TRANSCRIPTION FACTOR 49-RELATED | 20 | 262 | - | - | |
Tpr6g4005 | 266 | Pfam | WRKY DNA -binding domain | 127 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g4005 | 266 | SMART | WRKY_cls | 126 | 185 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g4005 | 266 | Gene3D | WRKY domain | 121 | 179 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g4005 | 266 | ProSiteProfiles | WRKY domain profile. | 121 | 183 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tpr6g4005 | 266 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 20 | 262 | IPR044810 | GO:0003700 | |
Tpr6g4005 | 266 | SUPERFAMILY | WRKY DNA-binding domain | 123 | 183 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g4005 | Tpr-Chr6 | 45240899 | 45243899 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g4005 | 20 | 260 | WRKY Transcription Factor Family | AT5G43290 | 43.542 | 4.51e-55 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tpr6g4005 | WRKY | 2.3e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g4005 | - | - | gmx:100803946 | 365.925 |