Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3986 ATATTCAATTGTCTTACATTTCAATGCAGTGGCTATATGTCTCCAGAATACGCAATGCAAGGACTGTTTTCCGATAAATCTGATGTGTTTAGCTTTGGAGTTTTGCTTCTTGAGATAATAAGCGGACGACGAAATTCAAAATTTTATGATTGCGAGAATTCTCTAACCCTTTTAGGATTTGTGTGGATACAATGGACAGAAGACAATATTTTATCTCTCATAGATCCAGAAATATATGATCCTATCCATTATAAATATATGTTTAGGTCCATACACATAGGACTTCTGTGTGTACAGGAATTTTCCATAGACAGACCAACTATGGCTGCTGTAACTTCAATGCTTAATAGTGAGATTTTAGATCTTCCTCCTCCAAAGAAACCTGCATTCATACTGAGACAGAATATGCTAAGCTCATTGTCGTCTGACGAGAACAATGATGGCTTGCATTCTATCAACTTAGTCAGTATTTCAGACCTCCAGGGAAGATAG 492 0.3659 IFNCLTFQCSGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSKFYDCENSLTLLGFVWIQWTEDNILSLIDPEIYDPIHYKYMFRSIHIGLLCVQEFSIDRPTMAAVTSMLNSEILDLPPPKKPAFILRQNMLSSLSSDENNDGLHSINLVSISDLQGR* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3986 163 Pfam Protein tyrosine and serine/threonine kinase 11 62 IPR001245 GO:0004672|GO:0006468
Tpr6g3986 163 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 10 162 - -
Tpr6g3986 163 SUPERFAMILY Protein kinase-like (PK-like) 10 140 IPR011009 -
Tpr6g3986 163 Pfam Domain of unknown function (DUF3403) 117 163 IPR021820 GO:0004674
Tpr6g3986 163 Gene3D Transferase(Phosphotransferase) domain 1 5 124 - -
Tpr6g3986 163 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 10 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3986 Tpr-Chr6 45099353 45099987 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3986 11 163 Receptor kinase-like Gene Family AT4G23150 46.497 1.13e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3986 PK_Tyr_Ser-Thr 4.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3986 - - mtr:MTR_7g056430 263.462