Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3984 ATGGCTACAGAAGTAAAAACCAGTCAATTAACAATACTAATGGATTCACCATTTATCATGAAAAGAAGGAATCATCTAAAAATAGATTTCAACAACTACACAAATATGTTTCTGTTCTTCATTTTGAGCATGCTATGTTTTGATTTTATAGATGTCAGTGTTGCCATAGACACTATTACATCAACTCAGTTTATCAAGGACCCTGAAACTCTAAGCTCCAAGAGTGGTAACTTCACTTTAGGCTTCTTCAGCCCTGAAAATTCGACGAATCGCTATGTTGGAATTTGGTGGCAGCCACAGTTCACAGTTGTATCGGTGCTTAACAGAGACCAACCTCTCAAAGATTCTTCTGGTGTTGTTAAAATATCTGATGATGGTAATGATCTTGTGGTACTCAATGGAAAGAAAGAGGTGATTTGGACATCAGATGTGCCAAATATCGCAACCAATTCAAGTTCCATACTTTTGGATTCAGGCAACCTTGTTCTAGTTGAAGGCACAACAGGAAAAACTATATGGGAGAGTTTCGAACATCCTTCAAATGTAATGTTACCAAACATGAAACTTACAGGCAACAAAATAACAGGTGAGAAAGTAAAACTCACATCATGGAAAACACCATTTGATCCATCTATTGGAAGCTTCACTTTAAGTGTTGAAAGACTTCTTATACCTGAAGTTTTCATTTGGAATGAAACTCGGCCATATTGGCGCACCGGTCCTTGGAATGGTAAGATTTTTACAGGGGTTCCTAATATGAAAACTCATTATCTCAGTGGTATACGTGTTATAGATGATGGAGAAGGAAATGTTTTGTTCTTTGAAATAACGACGGATACAGTTGGTCTCATAATCTATAATCTGACTTCAGAAGGAAATTGTGAAGAGAAATGGTGGGATGAAAAGAAGAAAGAATGGAAACAAACATCGAATATTCATGAAACAGAATGTGATATTTATGGTGTATGTGGAACTTTTGCAAGCTGTAATTCACAGAATTCACCAATATGTAGCTGTTTGAAAGGGTTTGAGCCAAAGAACAAAGAGGAATGGAATAGACAGAATTGGACTGGGTGTGTTAGGAGGACACCTCTGCAGCAGTGTGAAAGAGAAAGAAACCAAAACACAAGTGCTGACAAAAAAGCTGATGGTTTTTTAAAACTGCAGATGGTAAAAGTTCCTGATTTTGCAGATGGGTCATCTCTAACACTTTCATCAGATACATGCAGAAACCAGTGTTTGGAGAATTGTTCTTGTGTTGCATATTCATATGATGCTGACATTGGTTGTATGTCTTGGTCTGGAAATCTAGTTGACATACAACAATTTTCAAATGGCGGACTTTACTTATATATTCGCGTAGCACACACGGAACTTGATAAAGAGAGAAACATTACGGTCATCATTATTATAACAGTGATAGCCGGAACTGTCTTGGTTCTTGCTTGTGCATATATCATGTGGAGAAGGATATCTAACAAGCACGCAAGAAACCGAAGTGGAAGCGCAATTGGAGAACTGTCACAAGTTAAACTCCAAGAACTATTACTATTAGATTTAGGTAAGCTTGCAACTGCGACCAACAACTTTCACTCATCCAACAAACTTGGGCAGGGTGGTTTTGGACCAGTATACAAGGGGACAATGCATGATGGTCAGGAAATAGCGGTTAAAAGACTTTCTAAGTCATCCGGACAAGGTCAGGCAGAATTCATGAATGAAGTAGCGGTGATTTCTAAACTTCAACACCGAAATCTTGTAAGACTTCTTGGCTGCTGCGTTGAAGGAGAGGAAAAAATGTTGATATATGAGTACATGCCAAACAAAAGTTTGGATGTGTTTCTCTTTGATACATCAAAAAGTAAAATTCTTGATTGGAGTAAACGCTTTAGCATAATAGAAGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCCAGGCTAAAAATTATACATAGAGATTTGAAGCCAAGTAATATCTTACTAGATAATGAGCTTAATCCAAAAATATCAGACTTTGGTATGGCCAGAATCTTTGGAGGTAATGAAGATCAAGAAAATACTAGAAGAGTTGTCGGAACTTATGGCTATATGTCTCCAGAATACGCAATGCAAGGACTGTTTTCCGATAAATCTGATGTGTTTAGCTTTGGAGTTTTGCTTCTTGAGATAATAAGCGGACGACGAAATTCAAAATTTTATGATTGCGAGAATTCTCTAACCCTTTTAGGATTTGTGTGGATACAATGGACAGAAGACAATATTTTATCTCTCATAGATCCAGAAATATATGATCCTATCCATTATAAATATATGTTTAGGTCCATACACATAGGACTTCTGTGTGTACAGGAATTTTCCATAGACAGACCAACTATGGCTGCTGTAACTTCAATGCTTAATAGTGAGATTTTAGATCTTCCTCCTCCAAAGAAACCTGCATTCATACTGAGACAGAATATGCTAAGCTCATTGTCGTCTGACGAGAACAATGATGGCTTGCATTCTATCAACTTAGTCAGTATTTCAGACCTCCAGGGAAGATAG 2550 0.3733 MATEVKTSQLTILMDSPFIMKRRNHLKIDFNNYTNMFLFFILSMLCFDFIDVSVAIDTITSTQFIKDPETLSSKSGNFTLGFFSPENSTNRYVGIWWQPQFTVVSVLNRDQPLKDSSGVVKISDDGNDLVVLNGKKEVIWTSDVPNIATNSSSILLDSGNLVLVEGTTGKTIWESFEHPSNVMLPNMKLTGNKITGEKVKLTSWKTPFDPSIGSFTLSVERLLIPEVFIWNETRPYWRTGPWNGKIFTGVPNMKTHYLSGIRVIDDGEGNVLFFEITTDTVGLIIYNLTSEGNCEEKWWDEKKKEWKQTSNIHETECDIYGVCGTFASCNSQNSPICSCLKGFEPKNKEEWNRQNWTGCVRRTPLQQCERERNQNTSADKKADGFLKLQMVKVPDFADGSSLTLSSDTCRNQCLENCSCVAYSYDADIGCMSWSGNLVDIQQFSNGGLYLYIRVAHTELDKERNITVIIIITVIAGTVLVLACAYIMWRRISNKHARNRSGSAIGELSQVKLQELLLLDLGKLATATNNFHSSNKLGQGGFGPVYKGTMHDGQEIAVKRLSKSSGQGQAEFMNEVAVISKLQHRNLVRLLGCCVEGEEKMLIYEYMPNKSLDVFLFDTSKSKILDWSKRFSIIEGIARGLLYLHRDSRLKIIHRDLKPSNILLDNELNPKISDFGMARIFGGNEDQENTRRVVGTYGYMSPEYAMQGLFSDKSDVFSFGVLLLEIISGRRNSKFYDCENSLTLLGFVWIQWTEDNILSLIDPEIYDPIHYKYMFRSIHIGLLCVQEFSIDRPTMAAVTSMLNSEILDLPPPKKPAFILRQNMLSSLSSDENNDGLHSINLVSISDLQGR* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3984 849 Gene3D Phosphorylase Kinase; domain 1 490 605 - -
Tpr6g3984 849 ProSiteProfiles PAN/Apple domain profile. 368 455 IPR003609 -
Tpr6g3984 849 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 50 848 - -
Tpr6g3984 849 Pfam PAN-like domain 380 440 IPR003609 -
Tpr6g3984 849 SMART serkin_6 530 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3984 849 SMART ntp_6 380 454 IPR003609 -
Tpr6g3984 849 CDD B_lectin 62 179 IPR001480 -
Tpr6g3984 849 ProSiteProfiles Protein kinase domain profile. 530 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3984 849 ProSiteProfiles Bulb-type lectin domain profile. 56 176 IPR001480 -
Tpr6g3984 849 PIRSF SRK 29 849 IPR024171 GO:0004674
Tpr6g3984 849 SMART blect_4 62 179 IPR001480 -
Tpr6g3984 849 Pfam S-locus glycoprotein domain 237 347 IPR000858 GO:0048544
Tpr6g3984 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 94 210 IPR036426 -
Tpr6g3984 849 Pfam D-mannose binding lectin 102 205 IPR001480 -
Tpr6g3984 849 Pfam Domain of unknown function (DUF3403) 803 849 IPR021820 GO:0004674
Tpr6g3984 849 CDD STKc_IRAK 536 802 - -
Tpr6g3984 849 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 50 848 - -
Tpr6g3984 849 Gene3D - 51 176 IPR036426 -
Tpr6g3984 849 CDD PAN_AP_plant 373 455 - -
Tpr6g3984 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Tpr6g3984 849 Gene3D Transferase(Phosphotransferase) domain 1 606 807 - -
Tpr6g3984 849 SUPERFAMILY Protein kinase-like (PK-like) 518 824 IPR011009 -
Tpr6g3984 849 Pfam Protein tyrosine and serine/threonine kinase 532 731 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3984 Tpr-Chr6 45088889 45092197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3984 457 819 Receptor kinase-like Gene Family AT4G05200 51.781 1.22e-124 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3984 PK_Tyr_Ser-Thr 3.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3984 - - mtr:MTR_7g056430 1385.16