Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3974 ATGTCTTGGACTAGTAATCTACTTGATATAAAACAACTCGAAAGTGGAGGACTTGATCTATATGTTCGTGTAGCCGATGCAGAACCTGATAGAGGGAGAAACAAAACTATCATCATTACACTCCCAGTGATAATAGGAATTCTCATAATTGTCCTTTTTGCATATATCATGTGGAGAAGGACTTCAAAAAACTCAGATAAATCAACAAGGAAAAAGAACAAAAGTTTCCGACTATTTAATAAAGGTAGAATATCAGAACAAAATAATAATGACAAGGTCATTGGAGGACTATCCCAAGTTAAACTACAAGAGCTAATACTATTTGACTTTGGAAAGCTTGCTACCGCTACAAACAACTTCGACTGGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCAGTATACATGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGTTGGAAGAATTCATGAATGAAGTAGTTGTTCTTTGTAAGCTACAACACCGCAATCTTGTGAAACTTCTTGGCTGCTGTATTGAAGGCGATAAAAAGATGTTGGTGTATGAGTATATGTCAAACAAAAGTTTGGATGCATTTATCTTTGATTCATCGAAAAATAAACTACTAGATTGGAGGACACGATATAGCATCATAGAAGGAATAGCTCGAGGATTGCTATATCTTCACAGGGATTCTAGACTAAGAATTATACATAGAGATTTGAAGGCAAGTAATATATTGTTAGATGAGGAGCTGAATCCAAAAATATCAGATTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAGATCAAGCCAACACTACTAGAGTTGTTGGAACTTATGGCTATATGTCTCCTGAATATGCAATGCAAGGACTATTTTCGGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTTGAGATCGTTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGCATGCTCTAAGCCTTTTAGGATTTGTCTGGATACATTGGCGTGAAGGAAGTATTTTATCTTTAATAGATCCTGAAATATATGATCACAGTGATCATAATTATATTTCAAGATGCATACATATAGGGCTGTTGTGTGTACAAGAACTTGCTTTAGACAGGCCTAATATGGCTGCTGTAATTTCTATGCTTATCAGCGAGGCTGCATTTCTTCCTCCTCCTAGTCAGCCTGCTTTCATCTTGAGGCAGAATATGTTGAATTCAAAGTCGCCCGATGAAAATCAAAATGTTCTATCTATCAATAGGGTCAGTATTACGGACATATCTGGCAGATATACTACTCATCTCAGATTCTCAGTAATGGATTTCAGCTGCTGTTCAAAGCTGTTCTTTGTTTTGTTCATGCTGTTTTTGTATTTGTTACAAGTTAGTATTGCCTTAGACACTATCACATCATCTCAATTCATCAAGGATCCTGATACTCTACTCTCCAAAGATGGTAACTATTCCTTGGGATTCTTTAGCCCTGAAAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCGATCCACAAACGTTTGGGTGGCAAACAGAAACAAACCATTGAATGATTCTAATGGGATTGTCAAAATATCTGAAGATGGTAATCTTGTGGTGTTGAACGGACAGAAACAAGTCATATGGTCATCGAATGTTTCCAACATAGCATCCAATACCACATCTCAGTTTTTGGACTTTGGTAACCTTGTCCTTATGGAGAGCACAACTGGTAACACCTTATGGAATAGTATTCAGCATCCTTCGGATACATTACTTCCTGGTACGAAACTTTCTATGAGCAAAAGAACAGGTGAGAAAATCATACTAAGATCATGGAAAAGCCCTTCTGATCCATCTGTTGGGAGTTTCTCTGCTAGTTTTGTTGAGAACCGAAATATAATTCAAGTGTTTATATGGAATGAAAATCAACCATACTGGCGCAGTGGTCCTTATAATGGTCGGGTCCTTACAAGGATAGATACTATGACAGCTACATATTTTAAGGGTTTTGAAGGCGGAGATGATGGAAATGGGAATATTATTATATATTATACAATCCCAGATGGTTTGGATTTCTTAATCTATAACCTGAATTCACAAGGAAATTTAGATGAAACATTGTGGGATGATAAGAAGAAAGAATTGCAAGTTACATGGACTAGCCGAAAATCAGATTGTGATGTTTACGGTATATGTGGGGCATTTGCAAGTTGTAGTTCATTGAGCATACCAATATGCAGTTGTTTGAAAGGATTTGAACCGAGAAACATACAAGAATGGAACAGAAACAACTGGACTGGTGGTTGTGTTAGGAGGACGCCTTTGCAGTGCGAAAGGGTCATCAACAAAACCACGACTACAAAGAAAGATGGGTTTTTTAAATTGCAGGCAGTTAAAGTTCCAGATTTTGCCGAAGGCTCAGCTGTTACACCAGATATATGCCGAAGCTTATGCTTGGAGAATTGTTCTTGCACTGCGTACTCTAACGGTGCTGGGATTGGCTGTATGTCTTGGACGGGGAATTTAATTGACATAGAACATCTCCAAACAGGAGGACTTGATCTATATTTTCGCGTAGCCCATGAAGATCTTGATAGCAGAGGAAACAAAACAATCATCATTACAATTTCAGCGATAATAGGAACTCTCACAATTTCCATTTGTGCCTATATCATGTGGAGAAGGACTTCAAAAAACACAGCTAAACTGTGGCACTCTATCAAATCAAAAAGGGTAACGGACATCAAAGCTTTTCGACTATTTTATAAAGGTGGAACATCAGAAGTTCATACAAGTGGCGACACAATAGATGAGCTATTACTATTTGATTTTGAAAAGCTTGCAACCGCCACAAATAACTTTGACTTGTCCAACAAACTTGGACAGGGTGGTTTTGGTCCAGTATACAAGGGGAAACTGCAAGATGGTCAAGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGCTGGAAGAATTCATGAATGAAGTTGCGGTCCTTTGTAAGCTTCAACACCGTAATCTTGTAAGACTTCTTGGCTGTTGTGTTGACGGTGATGAAAAGATGTTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCACTTATATTTGATCCATCAAAAAGTAAACTCCTCGACTGGAGGACACGGTATAGCATTATAGAAGGAATAGCTCGAGGATTGTTGTATCTTCACAGAGATTCAAGACTAAGAATTATACATAGAGATTTGAAAGTAAGTAATATCTTGTTAGACGAGGCGCTGAATCCAAAAATATCTGACTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAGATCATGCAAATACTAATAGGGTTGTCGGAACCTATGGCTATATGTCTCCCGAATATGCAATGGAAGGTCTCTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGATACTAGAGATCATTATTGGTAGAAGGAACTCAAGCTTTTATGACAACGAGCTTGCTCTGAATCTCTTAGGATTTGTTTGGATTCATTGGAGGGAAGACAATATTTTATTGTTACTAGAACCAGAAATATATGATCATAATGATCATACGAATATTTTGAGATGCATACATATAGGACTTTTATGTGTACAAGAATCAGCTGTAGACAGGCCTACTATGGCTGCCGTGATTTCTATGCTTAACGGTGAGGTTGCATCTCTTCCTCCTCCAAATGAACCTGCATTCATCCTGAGGCAGAATATCAATCCGCTGCCCGAAGAAAAGGAAAGCATTAATAAAGTCAGTATTACAGAAGTATCTGGCAGATAG 3831 0.3803 MSWTSNLLDIKQLESGGLDLYVRVADAEPDRGRNKTIIITLPVIIGILIIVLFAYIMWRRTSKNSDKSTRKKNKSFRLFNKGRISEQNNNDKVIGGLSQVKLQELILFDFGKLATATNNFDWSNKLGQGGFGPVYMGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVLCKLQHRNLVKLLGCCIEGDKKMLVYEYMSNKSLDAFIFDSSKNKLLDWRTRYSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGREDQANTTRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIVSGRRNSSFYDNEHALSLLGFVWIHWREGSILSLIDPEIYDHSDHNYISRCIHIGLLCVQELALDRPNMAAVISMLISEAAFLPPPSQPAFILRQNMLNSKSPDENQNVLSINRVSITDISGRYTTHLRFSVMDFSCCSKLFFVLFMLFLYLLQVSIALDTITSSQFIKDPDTLLSKDGNYSLGFFSPENSTNRYVGIWWKSRSTNVWVANRNKPLNDSNGIVKISEDGNLVVLNGQKQVIWSSNVSNIASNTTSQFLDFGNLVLMESTTGNTLWNSIQHPSDTLLPGTKLSMSKRTGEKIILRSWKSPSDPSVGSFSASFVENRNIIQVFIWNENQPYWRSGPYNGRVLTRIDTMTATYFKGFEGGDDGNGNIIIYYTIPDGLDFLIYNLNSQGNLDETLWDDKKKELQVTWTSRKSDCDVYGICGAFASCSSLSIPICSCLKGFEPRNIQEWNRNNWTGGCVRRTPLQCERVINKTTTTKKDGFFKLQAVKVPDFAEGSAVTPDICRSLCLENCSCTAYSNGAGIGCMSWTGNLIDIEHLQTGGLDLYFRVAHEDLDSRGNKTIIITISAIIGTLTISICAYIMWRRTSKNTAKLWHSIKSKRVTDIKAFRLFYKGGTSEVHTSGDTIDELLLFDFEKLATATNNFDLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVAVLCKLQHRNLVRLLGCCVDGDEKMLMYEYMPNKSLDALIFDPSKSKLLDWRTRYSIIEGIARGLLYLHRDSRLRIIHRDLKVSNILLDEALNPKISDFGMARIFGGREDHANTNRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLILEIIIGRRNSSFYDNELALNLLGFVWIHWREDNILLLLEPEIYDHNDHTNILRCIHIGLLCVQESAVDRPTMAAVISMLNGEVASLPPPNEPAFILRQNINPLPEEKESINKVSITEVSGR* 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3974 1276 ProSiteProfiles Protein kinase domain profile. 963 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3974 1276 SMART blect_4 480 596 IPR001480 -
Tpr6g3974 1276 Pfam S-locus glycoprotein domain 655 764 IPR000858 GO:0048544
Tpr6g3974 1276 Pfam D-mannose binding lectin 520 622 IPR001480 -
Tpr6g3974 1276 CDD PAN_AP_plant 782 869 - -
Tpr6g3974 1276 CDD B_lectin 480 596 IPR001480 -
Tpr6g3974 1276 SUPERFAMILY Protein kinase-like (PK-like) 105 418 IPR011009 -
Tpr6g3974 1276 SUPERFAMILY alpha-D-mannose-specific plant lectins 511 627 IPR036426 -
Tpr6g3974 1276 Gene3D Phosphorylase Kinase; domain 1 932 1038 - -
Tpr6g3974 1276 Gene3D Phosphorylase Kinase; domain 1 82 195 - -
Tpr6g3974 1276 SMART serkin_6 963 1234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3974 1276 SMART serkin_6 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3974 1276 SMART ntp_6 796 868 IPR003609 -
Tpr6g3974 1276 Gene3D Transferase(Phosphotransferase) domain 1 1039 1240 - -
Tpr6g3974 1276 Gene3D Transferase(Phosphotransferase) domain 1 196 396 - -
Tpr6g3974 1276 Pfam PAN-like domain 795 854 IPR003609 -
Tpr6g3974 1276 CDD STKc_IRAK 126 391 - -
Tpr6g3974 1276 CDD STKc_IRAK 969 1236 - -
Tpr6g3974 1276 ProSiteProfiles Protein kinase domain profile. 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3974 1276 SUPERFAMILY Protein kinase-like (PK-like) 944 1234 IPR011009 -
Tpr6g3974 1276 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 468 1273 - -
Tpr6g3974 1276 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 1 436 - -
Tpr6g3974 1276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1084 1096 IPR008271 GO:0004672|GO:0006468
Tpr6g3974 1276 Gene3D - 469 594 IPR036426 -
Tpr6g3974 1276 ProSiteProfiles PAN/Apple domain profile. 786 869 IPR003609 -
Tpr6g3974 1276 Pfam Protein tyrosine and serine/threonine kinase 122 334 IPR001245 GO:0004672|GO:0006468
Tpr6g3974 1276 Pfam Protein tyrosine and serine/threonine kinase 965 1231 IPR001245 GO:0004672|GO:0006468
Tpr6g3974 1276 ProSiteProfiles Bulb-type lectin domain profile. 474 593 IPR001480 -
Tpr6g3974 1276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Tpr6g3974 1276 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 468 1273 - -
Tpr6g3974 1276 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3974 Tpr-Chr6 44991558 45008868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3974 27 418 Receptor kinase-like Gene Family AT4G05200 50.127 1.09e-120 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3974 PK_Tyr_Ser-Thr 5.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3974 - - vun:114184390 1651.34