Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3971 ATGGTTTTCAGCAACTATGCAAATTTGTTGTCTGTTTTGTTCATTTTGTTTTGCTATTTGTTACATGTTAGTATCGGTATAGACACGATCACATCATCTCGATTTATCAAGGACCCTGAAACTCTAATCTCCAAAGATGGTAACTTCACCTTGGGGTTCTTCAGTCCTAAAAATTCTACAAATCGATATGTTGGAATTTGGTGGAAGTCTCAATCTACAATCATATGGGTGGCAAACAGAAACCAGCCACTGAATGATTCTAATGGGATTGTCGCAATATCTGGAGATGGCAATCTTGTCGTCTTAAATGGACATAAACAAGTCATTTGGTCATCAAATGTTTCGAACATAGCATCCAATACAACTTCTCAGTTTTGGGACTTTGGTAACCTTGTCCTTTTGGAGAGCATAACAAGAAACATTTTATGGCAGAGTATTCAGCAACCGTCGGATACATTACTTCCTAGCATGAAACTATCAATCAACAAAAGGACAGGTAAAAGTGTAAAACTCAAATCATGGAGAAGTCCTTCTGATCCATCTGTTGGCAACTTCTCTTCTAGTACGGTTGAACGCCAAAATATACTTGAAGTGATCATTTGGAATGAAACTCGAACATGCTGGCGCAGCGGTCCTTGGAATGGCGGGGTCTTCACTGGGATACAGGCAATGACAATGGCGTATTTTTTTGGTTTTCAAGCTGGAGACGATGGAGAAGGGAATACCATTTTATATTACACAATACAAAATGATGGGGATTTTTTTATGTATCACTTGAATTCAAAAGGAATATTAGAAGAAACACGGTGGTATGATACGAAAAAAGAAGTTCGTGTTACATGGACAAGCCGAGAGTCAGAGTGCGATGTTTATGGTATATGTGGGATATTTGCAACGTGTAATTCATTGAGCTCACCAATATGCAGCTGTTTGAGAGGATTTGAACCGAGAAACATACGTGAATGGAATAGAAACAACTGGACCGATGGATGTGTTAGGAGGACACCTTTGCAGTGTGAAAGGGTCAACAATAAAAGCACGAGTAGAAAGGAAGACGGGTTTTCGAAACTACAGACTATTAAAGTTCCTGATTTTGCCGAAGGTTCAAGTGTTACATCAGACATATGCAGAAACTTATGCTTGAAGAATTGCTCTTGCCTTGCATATTCTCATAATGATGGGATTGGATGTATGTCTTGGACTGAGAATCTACTTGACATACAACAACTCCAAATTGGAGGACTTAATCTGTATGTCCGTGTGGCCTACGCAGAACTTGATAAAGGGAGAAACATGACAACCGTCATTATAAGTACAGTGATAATCGGAACTCTCATAATTGTCATTTGTGCATATATCATATGGAGACGAAGATCAAACCACCTAGCTAAACTGTGGCACTTTGTTAAATCAGCAAGGAAAAAGAACAACAAGTCTTTCCAACTTTTTAATAGAGGTGGATCACCAGAACATTATGCTACTGACAATGAAATCGGAGAATCACCTCAAGTTAAACTACAAGAACTATTAATATTTGATTTTGAAAAGCTTGCAACTGCCACAAACAACTTCCATTTGTCCAACAAACTTGGACACGGCGGTTTTGGTACAGTATACAAGGGGAAACTGCAAGATGGTCAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGCCAAGGGTTGGAAGAATTCATGAATGAAGTTGTGGTGATTTGTAAGCTTCAACACCGCAATCTTGTAAGACTTCTTGGCTGTTGTATTGAAGGCGATGAGAAGATGCTGATGTATGAGTACATGCCAAACAAAAGTTTGGATGCATTCATCTTTGATCCGTCAAAAAATATACTCCTAGATTGGAGGACACGGTATAACATTATAGAAGGAATAGCTCGAGGATTGCTATATCTTCACAGAGATTCCAGATTAAGAATTATTCATAGAGATTTGAAGGCAAGTAATGTTTTGTTAGACGAGGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTCGGAGGCGGAGATGATCCGGTCAATACTAACAGGATTGTTGGAACTTATGGCTATATGTCTCCTGAATATGCAATGCAAGGATTATTTTCTGAGAAAACAGATGTTTTTAGCTTCGGTGTTTTGATATTAGAGATTGTTACCGGGAGAAGAAACTCAAGTTTCTACGACAATGAGCACGCTCTAAGCCTTTTAGGATTCGTGTGGATAAAATGGAGGGAAGGCAATATTTTATCTCTCATAGATGAAGGAATATATGATCCTAGTCATCATAATTACATTTTAAGATACATACATATAGGACTTTTGTGTGTACAAGAAATTGCTGTAGATAGACCTACTATGGCTGAAGTAATTTCTATGCTTAATAGTGAAGCTGCATTACCTTCTCCTTCAAGTAAACCTGCATTCATTCTGATGAAGAGTATGTTGAATTCAAAGTGGCCTGAAGAATGTCAAAGTAGTAGTTCCAACAACAATGTTAGTATTACAGAAATTTGTGGCAGATATGGTGTAACTGTTGATCATATACTCTTCATCTCAGTAATGGGTTTCATCAGTTGTTCAAATCTATTTTCTGTTTTGTTCATTCTATGTTGCTATTTGTTACACTTTAGTATTGCCATAGACACCATAACATCATCACAATTCATCAAGGATCCTGAAACTCTAATCTCCAAAGATGGTAACTTCACCTTTGGATTCTTTAGCCCTATAAATTCTACAAAACGCTACGTTGGAATTTGGTGGATGTCTCAATCTACAATTGTATGGGTGGCAAACAGAAACCATCCACTGAATGATTCTAATGGGATTGTCACAATATCGGAAGATGGCAATCTTGTGGTATTGAATGGAACAAAACAAGTCATTTGGTCTTCAAATTTGTCCAACAAAACATCAAATACTGCTACGGCCCAGTTTTCAGACTATTGTAACCTTGTCCTGATGGAAAGCACAACAGGAAACATCTTGTGGCAGAGTTTTCAAAAACCTTCAGATACATTTCTTCCAGGCATGAAACTTACAAGCAACAAAAGAACAGGTGAAAAAGTACGACTCACGTCATGGAAAAACCCTTCAGATCCATCTGTTGGGAGCTTTTCTGTCATTTTTTTGGATCGCATAAATTTACCTGAGCTGTTCGTGTTCAATGAAACTCAACCATACTGGCGCAGTGGTCCTTGGGATGGTGTAGTTTTTACTGGCTTACCGATGATGACAACTCCGTATGTTGATGGTGTTCACGTTGGAGATGATGCGGAAGGTAATATTGATATCTATTATACAGTACCAAGGGACATAACACTGGTAATTTATAATCTGAACTCACAAGGCCAATTAGTAGCAAAATGGTGGGATTATGAGAAGAAAGATGTTCAAATTGCATGGAGTAGCAAATTATCAGACTGTGACATTTATGGTATATGTGGAGCATTTTCAAGCTGTAGTTCATTGAGCTCACCAATATGTAGTTGTTTGAGAGGATTTATACCTAGGAACAAACAAGAGTGGAATAGACACATCTGGACTGGTGGGTGTGTTAGAAGGGAACTTTTAAAGTGTGAAAGGATGAACAATAAAACAACAAAAGTAGATACAAAGGAAGATGGATTTTTGAAAATGCAGATGGTAAAAGTTCCTGATTTTGCACAAGGCTCAGCAGTTACACCAGACATTTGCAGAAGTCAGTGCTTAGAGAATTGCTCTTGCATTGCATATTCTCACAACACTGGTATTGGTTGTATGTCTTGGACTGGGAATCTATTTGATATACAACAATTCCAAAATGGAGCGCTTGATCTATATGTTCGTGTAGCCTATACAGAACTTGATAAAGAGAGAAACACAACAATCATAATCATAGCTACATTGATTATAGGAACTCTCATAATTGTCATGTGCGCATATGTTATGTGTAGAAGGTCGTCTAATAACACAGCAGCTAAACTGTTGCACTCTCTTAAATCAAAAAGGAAAAAGAACATCAAAGCTTTACAGTTATTTAATAAAGTTGGAACATTAGAAGATCATACAAGCGACAGCATAATTAGAACTCTGTCACAAGTTAAACTCCAAGAGCTTTTACTATTTGATTTTGAAAAGCTTGCAATTGCCACAAACAACTTCCACTCGTCCAATAAACTTGGACAGGGTGGTTTTGGTCCTGTATACAAGGGAAAACTACAAGACAATCAGGATATAGCAGTTAAAAGACTTTCTAAATCATCTGGACAGGGTCTAGAAGAATTCAAGAATGAAGTAGTTGTGATTTGTAAGCTTCAACACCGCAATCTTATAAGACTTCTTGGATGCTGTGTTGAAGGAGAGGAAAAGATGTTGATATATGAGTACATGCCAAACAAAAGTTTGGATGCATTTGTCTTTGATCCATCAAAAAATAAACTCCTAGACTGGAGGACCCGGTATAGCATTATAGAAGGAATAGCTCGAGGAATGCTTTATCTTCATAGAGATTCCAAATTGAGAATTATACATAGAGATTTGAAGACAAGTAACATCTTGCTAGACGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATATTTGGAGGGAGAGAAGATAAGGCCAATACTATCAGGGTTGTCGGAACATATGGTTATATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCGGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGATACTAGAGATTATAAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAACATGCACTGACCCTTCTAGGATTTGTATGGATACAATGGAGGGAAGGAAATATTTTATCTTTAGTAGATCCAGAAATATATGATCTTAGTCACCATAAGTATATTTCAAGGTGTATACACATAGGACTTCTGTGTGTACAAGAGGTTGCCGTTGACAGGCCCACTATGGCTGCAGTAATTTCTATGCTCAACAGTGAGGCTGAATTACTTCCTCCTCCAAGTCAACCTGCATTTATCTTGAGGCAAAATATGTTGAGTTCAATGTCTCATGAAAAAAGTCATAGACCCTATTCTATCAATACTGTTAGTATTACAGACATCAGTGGCAGATAG 5106 0.3768 MVFSNYANLLSVLFILFCYLLHVSIGIDTITSSRFIKDPETLISKDGNFTLGFFSPKNSTNRYVGIWWKSQSTIIWVANRNQPLNDSNGIVAISGDGNLVVLNGHKQVIWSSNVSNIASNTTSQFWDFGNLVLLESITRNILWQSIQQPSDTLLPSMKLSINKRTGKSVKLKSWRSPSDPSVGNFSSSTVERQNILEVIIWNETRTCWRSGPWNGGVFTGIQAMTMAYFFGFQAGDDGEGNTILYYTIQNDGDFFMYHLNSKGILEETRWYDTKKEVRVTWTSRESECDVYGICGIFATCNSLSSPICSCLRGFEPRNIREWNRNNWTDGCVRRTPLQCERVNNKSTSRKEDGFSKLQTIKVPDFAEGSSVTSDICRNLCLKNCSCLAYSHNDGIGCMSWTENLLDIQQLQIGGLNLYVRVAYAELDKGRNMTTVIISTVIIGTLIIVICAYIIWRRRSNHLAKLWHFVKSARKKNNKSFQLFNRGGSPEHYATDNEIGESPQVKLQELLIFDFEKLATATNNFHLSNKLGHGGFGTVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVICKLQHRNLVRLLGCCIEGDEKMLMYEYMPNKSLDAFIFDPSKNILLDWRTRYNIIEGIARGLLYLHRDSRLRIIHRDLKASNVLLDEELNPKISDFGMARIFGGGDDPVNTNRIVGTYGYMSPEYAMQGLFSEKTDVFSFGVLILEIVTGRRNSSFYDNEHALSLLGFVWIKWREGNILSLIDEGIYDPSHHNYILRYIHIGLLCVQEIAVDRPTMAEVISMLNSEAALPSPSSKPAFILMKSMLNSKWPEECQSSSSNNNVSITEICGRYGVTVDHILFISVMGFISCSNLFSVLFILCCYLLHFSIAIDTITSSQFIKDPETLISKDGNFTFGFFSPINSTKRYVGIWWMSQSTIVWVANRNHPLNDSNGIVTISEDGNLVVLNGTKQVIWSSNLSNKTSNTATAQFSDYCNLVLMESTTGNILWQSFQKPSDTFLPGMKLTSNKRTGEKVRLTSWKNPSDPSVGSFSVIFLDRINLPELFVFNETQPYWRSGPWDGVVFTGLPMMTTPYVDGVHVGDDAEGNIDIYYTVPRDITLVIYNLNSQGQLVAKWWDYEKKDVQIAWSSKLSDCDIYGICGAFSSCSSLSSPICSCLRGFIPRNKQEWNRHIWTGGCVRRELLKCERMNNKTTKVDTKEDGFLKMQMVKVPDFAQGSAVTPDICRSQCLENCSCIAYSHNTGIGCMSWTGNLFDIQQFQNGALDLYVRVAYTELDKERNTTIIIIATLIIGTLIIVMCAYVMCRRSSNNTAAKLLHSLKSKRKKNIKALQLFNKVGTLEDHTSDSIIRTLSQVKLQELLLFDFEKLAIATNNFHSSNKLGQGGFGPVYKGKLQDNQDIAVKRLSKSSGQGLEEFKNEVVVICKLQHRNLIRLLGCCVEGEEKMLIYEYMPNKSLDAFVFDPSKNKLLDWRTRYSIIEGIARGMLYLHRDSKLRIIHRDLKTSNILLDEELNPKISDFGMARIFGGREDKANTIRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLILEIISGRRNSSFYDNEHALTLLGFVWIQWREGNILSLVDPEIYDLSHHKYISRCIHIGLLCVQEVAVDRPTMAAVISMLNSEAELLPPPSQPAFILRQNMLSSMSHEKSHRPYSINTVSITDISGR* 1702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3971 1701 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 876 1699 - -
Tpr6g3971 1701 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 839 - -
Tpr6g3971 1701 SUPERFAMILY Protein kinase-like (PK-like) 509 828 IPR011009 -
Tpr6g3971 1701 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Tpr6g3971 1701 Gene3D Transferase(Phosphotransferase) domain 1 600 803 - -
Tpr6g3971 1701 Gene3D Transferase(Phosphotransferase) domain 1 1459 1660 - -
Tpr6g3971 1701 CDD STKc_IRAK 530 796 - -
Tpr6g3971 1701 Gene3D Phosphorylase Kinase; domain 1 500 599 - -
Tpr6g3971 1701 Gene3D Phosphorylase Kinase; domain 1 1346 1458 - -
Tpr6g3971 1701 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 21 839 - -
Tpr6g3971 1701 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 876 1699 - -
Tpr6g3971 1701 Pfam D-mannose binding lectin 73 175 IPR001480 -
Tpr6g3971 1701 Pfam D-mannose binding lectin 928 1031 IPR001480 -
Tpr6g3971 1701 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3971 1701 SUPERFAMILY Protein kinase-like (PK-like) 1368 1692 IPR011009 -
Tpr6g3971 1701 ProSiteProfiles Bulb-type lectin domain profile. 882 1002 IPR001480 -
Tpr6g3971 1701 CDD B_lectin 33 145 IPR001480 -
Tpr6g3971 1701 ProSiteProfiles PAN/Apple domain profile. 1195 1280 IPR003609 -
Tpr6g3971 1701 ProSiteProfiles Protein kinase domain profile. 1383 1669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3971 1701 CDD B_lectin 888 1002 IPR001480 -
Tpr6g3971 1701 CDD PAN_AP_plant 335 422 - -
Tpr6g3971 1701 Pfam Protein tyrosine and serine/threonine kinase 1385 1652 IPR001245 GO:0004672|GO:0006468
Tpr6g3971 1701 Pfam Protein tyrosine and serine/threonine kinase 525 795 IPR001245 GO:0004672|GO:0006468
Tpr6g3971 1701 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Tpr6g3971 1701 Gene3D - 878 1003 IPR036426 -
Tpr6g3971 1701 Gene3D - 22 147 IPR036426 -
Tpr6g3971 1701 CDD STKc_IRAK 1389 1655 - -
Tpr6g3971 1701 Pfam PAN-like domain 349 407 IPR003609 -
Tpr6g3971 1701 Pfam PAN-like domain 1207 1265 IPR003609 -
Tpr6g3971 1701 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524
Tpr6g3971 1701 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Tpr6g3971 1701 Pfam S-locus glycoprotein domain 1064 1173 IPR000858 GO:0048544
Tpr6g3971 1701 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Tpr6g3971 1701 SMART ntp_6 349 421 IPR003609 -
Tpr6g3971 1701 SMART ntp_6 1207 1279 IPR003609 -
Tpr6g3971 1701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1504 1516 IPR008271 GO:0004672|GO:0006468
Tpr6g3971 1701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Tpr6g3971 1701 SMART serkin_6 1383 1626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3971 1701 SMART serkin_6 524 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3971 1701 SUPERFAMILY alpha-D-mannose-specific plant lectins 920 1036 IPR036426 -
Tpr6g3971 1701 SMART blect_4 33 149 IPR001480 -
Tpr6g3971 1701 SMART blect_4 888 1005 IPR001480 -
Tpr6g3971 1701 CDD PAN_AP_plant 1204 1280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3971 Tpr-Chr6 44967979 44979734 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3971 497 842 Receptor kinase-like Gene Family AT4G11530 53.693 1.88e-114 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g3971 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3971 - - vun:114184390 2292.69